Malassezia sympodialis: MSY001_2685
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Entry
MSY001_2685 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
msym
Malassezia sympodialis
Pathway
msym03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSY001_2685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msym03009
]
MSY001_2685
Ribosome biogenesis [BR:
msym03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MSY001_2685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WDR55
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_NWD2_C
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
30057570
NCBI-ProteinID:
XP_018741196
UniProt:
M5ECB9
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MAAIAPREKRVRAAGAQEAESHAVERRRDVLYAPFRALGYITNGIPFILQVRFGGKDAQT
PDVNVVTCLGDTWAMWNAERMTLLFVGPPLAHPISAMAHATSPDSLVVAAGPSVHRFVRG
HEVASYSTAIPEEGVSETFLSALLVFGDYICALAADGSCLFVWSLTTTELMQKIVFADGF
IASQFVHPATYLNKVVVGAADGSLQLWNVRTASLIHTFSAVDVRGGQASSTHAGVVCMEQ
SPAMDVLAVAYADGMVALYDIRVGEALFSVRVEGGLGARCLAFRTDNVAHTLAIATRAGA
LSLFDLDAAHADGPVSGAPRLLHSMQHAHDSAIGAIEFVPGQPLLISTGADNALKQWFFE
SPTLPPRLLKSRSGHALPPHLIRYYGDDGRAMLSASRDRSVRCLSVVRDSRSFELSQGSI
ERQSHKLAVEASSLKLRPVSSLSYSTMRSRDWDDVLTTHAGDTYAHTWTVRDKHMNKALL
SVSRSKRDTAVATASCVSACGNFALVGTSDGRVEMFNMQSHMHRRTFQTDSASPISDVVT
DAVNQLCLASSQDGQLHYFDFHTANKLASMPLSSGISGLRLHRASQLLAVLSDDLVLAVV
DIETRRVARRFRGFRGRILDATFSADGRWLVACSTDSVIRTFDLATAQLIDAFRPSSMAT
SVTFSPAGDFLATAHVDSVGVHLWVNRAQFTSVALRALDMGGVVPERETAVPTVQGAALE
TSAPSDLDVGEPELQRTYTSPPQLSDADGPLLTLSTMPRSRWMTLLHLDTIQRRNKPQEP
PKKPEKAPFFLDAAPVAAPAEPAPADTPPRPREAPHLAFESDMERRLRVAVQAADVGPLF
TYLHTLSASQLDTEIRGLESVAQQTLFLQALALRLRSKLDWEAVQAMLHVFLTCHAEVLQ
AEGVHPEHAADADAEGQALALALREVLQEQRSEGARLVDSLDYCLGTLSFLRNVPLSSV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgatcgcgccgcgagaaaagcgcgtgcgtgcggccggcgcacaggaggctgag
tctcatgcggtggaacgccgtagggatgtgctctatgcgccgttccgtgcgctaggctac
attacgaatggcatcccctttatcttgcaggttcgcttcggtggaaaggatgcacagacc
cctgatgtgaacgtcgtgacttgtctgggcgacacctgggcgatgtggaatgcggagcga
atgacactcttgtttgtgggaccaccgctggctcatcccattagtgcgatggctcatgcc
acctcgccagacagcctggtcgttgcagcaggcccctccgtccaccgttttgtgcgtggc
cacgaagtggcgtcctactcgacggccattcccgaggagggcgtgagtgagacttttctg
tccgcgctgcttgtctttggagactatatttgcgcactcgctgctgacgggtcgtgcttg
tttgtgtggtcgctcaccaccacggagctcatgcaaaagatcgtgtttgccgatggcttt
attgcgtcgcagtttgtgcacccggcgacgtacctaaataaggtcgttgtcggtgcggcc
gatggttccctacagttatggaacgtgcgcacggcttctttgattcacaccttctctgcg
gtcgacgtgcgcggcggccaagcctcgtcgactcacgcgggtgtcgtatgcatggaacag
agccctgcgatggatgtgctcgccgtggcctatgcggatggcatggttgccttgtacgat
atacgcgtcggcgaggcgctcttctctgtgcgagttgaaggcggcttgggcgcgcggtgc
ttggcattccgtacggacaatgtggctcacacgcttgctattgcgacgcgcgcaggcgcg
ctctctctctttgacttggacgccgcccacgccgatgggcctgtaagcggtgcgccgcgg
cttctgcactcgatgcagcatgcccacgacagtgccattggcgctatcgagtttgtgccg
ggccagccactgctgatatccacgggcgctgacaatgcgctgaaacagtggttcttcgag
tcgcctacgctcccgccgcgcctactcaagtcacgcagtgggcacgcgctgcccccgcat
ctcatacgatactatggcgacgatggccgagccatgctgtcggcttcgcgggaccgcagc
gtgcggtgcctgagcgtcgtgcgcgacagccgctcgtttgagctgagccagggctcgatc
gagcgccagtcgcacaagctggccgtggaggcgagctcgctcaagctacggcctgtctcg
tcgctctcgtacagcacgatgcgctcgcgcgactgggacgatgtgctgacgacgcacgcc
ggcgacacctacgctcatacttggacagtgcgagacaagcacatgaacaaggcgctcctg
agcgtgtcgcgctcgaagagggacactgcggtggcgacggcgagctgcgtaagtgcgtgt
ggcaactttgcgctcgtcggcacgagcgatgggcgcgtcgagatgttcaatatgcagagc
cacatgcaccggcgcaccttccagacagacagcgcgtcgcccatctcggatgtggtcaca
gacgctgtcaaccagctgtgcctcgcaagctcgcaggatggccagctgcactactttgac
ttccacacggcgaacaagctggcgtccatgcccctgtcgtcgggcatcagcggcctgcgc
ctccaccgcgcctcgcaattgctcgcggtcctgagcgacgacctggtgctggctgtcgtg
gatatcgagacgcgccgcgtcgcgcgtcggttccgcggctttcgtggacgcattctcgat
gccaccttttctgccgatgggcgctggctcgtggcgtgcagcacggacagtgtgattcgc
acgtttgatctggcaacggcgcagctcatcgacgcgttccgcccctcgagcatggcgact
agtgtgaccttctcgccggccggcgactttctcgcgacggcacatgtcgacagtgtcggt
gtgcatctgtgggtcaaccgtgcgcagttcacctctgtggcgctacgtgcgctggatatg
ggcggtgtcgtgcctgagcgcgagaccgctgtgcccaccgtgcagggcgccgcgctcgag
acgagcgcgccgtcggacctggacgtgggcgagcctgagctgcagcgcacgtacacgagc
ccgccccagctgagcgacgcggacgggccgctcctgacgctcagcaccatgccgcgcagc
cggtggatgacgctcctccacctcgataccatccagcggcgcaacaagccacaggagcct
ccgaagaagccagaaaaggcgccgttctttttggatgctgcgccagtcgcagcgcctgcc
gagcctgcgcctgccgacacgccgccgaggcccagggaggcgccgcatctcgcgttcgag
tcggacatggagcgccgcctgcgtgtggcggtgcaagccgccgatgtggggccgctgttc
acgtacttgcacacgctctctgcgtcgcagctggacactgagatccgaggactcgagtcg
gtcgcgcagcagaccctcttcttgcaagcgctggcgctgcgcctccgcagcaagctcgac
tgggaggcggtgcaggcgatgctccatgtgtttctcacgtgccatgctgaggtgctccaa
gcggaaggcgtgcaccccgagcatgccgccgacgcggacgccgaggggcaggcgctggcc
ctggccttgcgcgaggtgctccaggagcagcgcagcgagggcgcgcgcctggtcgactcg
ctggactactgcctcggcacgctgagtttcctgcggaacgtgccgctatcgtcggtgtaa
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