Malassezia sympodialis: MSY001_2796
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Entry
MSY001_2796 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
msym
Malassezia sympodialis
Pathway
msym03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MSY001_2796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msym03041
]
MSY001_2796
03009 Ribosome biogenesis [BR:
msym03009
]
MSY001_2796
Enzymes [BR:
msym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSY001_2796
Spliceosome [BR:
msym03041
]
Complex A
U1 snRNP components
U1 related factors
MSY001_2796
Complex B
MSY001_2796
Ribosome biogenesis [BR:
msym03009
]
Eukaryotic type
Pre-60S particles
Helicases
MSY001_2796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
30057681
NCBI-ProteinID:
XP_018741300
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MSYGGSSGGYGNGYGGGYGGGYGGGYGGGYGGGYGGGYSGGYGGGYGGGYGGGYGGGYGG
SGGSRGGSSGGLGAGLSTINWDQAELVPFEKNFYKEDPAVSARPDEEINEFRKSKEMTLR
GSDVPKPVKTFEEAGFPEMILREISKMGFQEPSAIQSQAWPIALSGRDLVAIAETGSGKT
IGFALPSFVHIKAQPPLKYGDGPVALILAPTRELAVQIQNECNRFGSACRVRTAAVYGGV
PKGPQIRDLQRGAEIVIATPGRLIDMLEIGKTNLRRVTYLVMDEADRMLDMGFEPQIRKI
VEQIRPDRQTLMFSATWPKEVQRLAADFLNNFVQVNIGSTELAANHNVKQVIEVCTDFEK
RGRLIKHLEHISQENGKVIIFTGTKRIADELTKFLREDGWPGLAIHGDKEQGERDWVLKE
FKSGRSPIMVATAVASRGLVINYDFPTNTEDYIHQIGRTGRAGRKGTAITFFTSENSKSA
RELVGILREANQEIPPELDEMVRYSGGGRGGGRGFRGGRRGGGGGFRRFGGGPRASGANN
VSVGGSRW
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacggtggttctagcggtggttacggtaacggctatggtggtggctacggtggt
ggctacggtggcggctacggtggtggctacggtggcggttacggtggtggctacagcggt
ggctacggcggcggctacggaggcggctatggcggtggctacggtggcggctacggcggc
agcggtggctcgcgtggcggcagtagtggcggtctcggcgctggcctatccactatcaac
tgggaccaagctgagttagttcccttcgagaaaaacttttacaaggaggaccctgctgtg
tcggcacgaccggacgaagagattaatgagttccgcaagtcaaaggagatgactctgcgt
ggttcagatgttcccaagcctgtcaagacattcgaagaggctggtttccctgaaatgatc
ttgcgtgagatcagcaagatgggcttccaagagccgtcggcgattcagtcccaggcgtgg
ccgattgctctgagtggtcgcgacttggtagcgattgccgagacgggctcaggtaagacg
atcggctttgcgctgcctagctttgtgcatattaaggcgcagccaccgctgaagtatggc
gatggacctgtggccttgattttggcgccgacgcgtgagttggctgtgcagatccaaaat
gagtgcaaccgcttcggctcggcgtgccgcgtccgcactgcggcagtgtatggtggtgtg
cctaagggaccgcagatccgcgatcttcagcgcggggcggagattgttattgcgacgccg
ggtcgtctgatcgacatgttggagattggcaagacgaacctccgtcgcgtgacgtatttg
gtcatggatgaggctgatcgtatgctggacatgggtttcgagccccagatccgtaagatt
gtggaacaaattcgccctgatcgccaaacgttgatgttttcggctacgtggccgaaggag
gtgcagcgtctggctgcagacttcttgaacaactttgtgcaggtcaatattggatcgacc
gagttggccgcgaaccacaatgtgaagcaggttattgaggtgtgcaccgactttgagaag
cgcggccgcctcatcaagcatctggagcatatcagccaggaaaacggcaaggtgattatt
ttcacgggcaccaagcgtattgcggacgagcttaccaaatttttgcgcgaggacggctgg
cctggtttggccattcatggtgacaaggagcaaggcgagcgtgactgggtgctgaaggaa
ttcaagtcgggtcgcagcccgattatggtggcgacggctgttgcctctcgtggtcttgtg
atcaactacgacttcccgaccaataccgaggactacattcatcaaatcggtcgtacgggc
cgtgctggtcgcaagggcacggcaatcacgttctttacctcggagaactccaagtccgcg
cgcgaactcgtgggcattctgcgcgaggccaaccaggagattccacccgagctggacgaa
atggtgcgctattcgggcggtggccgcggcggtggccgcggcttccgtggcggtcgtcgc
ggaggcggcggtggcttccgccgctttggcggcggtcctcgcgcctcgggcgcgaacaat
gtgagcgtcggcggctcgcgctggtaa
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