KEGG   Malassezia sympodialis: MSY001_2803
Entry
MSY001_2803       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
msym  Malassezia sympodialis
Pathway
msym03013  Nucleocytoplasmic transport
msym03015  mRNA surveillance pathway
msym03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MSY001_2803
  09122 Translation
   03013 Nucleocytoplasmic transport
    MSY001_2803
   03015 mRNA surveillance pathway
    MSY001_2803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_2803
   03041 Spliceosome [BR:msym03041]
    MSY001_2803
Enzymes [BR:msym01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MSY001_2803
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     MSY001_2803
Spliceosome [BR:msym03041]
 Complex C
  Other components
   EJC/TREX
    MSY001_2803
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MSY001_2803
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 CMS1 AAA_19
Other DBs
NCBI-GeneID: 30057688
NCBI-ProteinID: XP_018741307
UniProt: M5EBX4
LinkDB
Position
Unknown
AA seq 433 aa
MENEDLIDYEEEVSVPTSNTAPADSKAATSAPAGDADEGKKGSYVGIHSTGFRDFLLKPE
LLRAISDLGFEHPSEVQQECIPQSILGMDVVCQAKSGMGKTAVFVLATLQQLEPVDGEVS
VIVLCHTRELAYQIRNEYARFTKYMPEVRTSVVYGGTPIKEDQAMLADKAKCPHILVGTP
GRMNGLVRDKSLKAGEVKHFVLDECDKMLDNLEMRRDVQEIFRATPHHKQVMMFSATLAK
EIRPTCKKFMQNPLEIYVDDETKLTLHGLQQYYVRLEEAAKNRKLNDLLDTLEFNQVIIF
VKSISRANQLDQLLRECNFPSICIHGGLPQDERIKRYQQFKNFEKRILVATDIFGRGIDV
ERVNVSISYDTPSDADSYLHRVGRAGRFGTKGLAITFVSSDEDAEVLKQIQSRFEVAVPE
LPDTIEASTYMNA
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggagaacgaagatcttattgattacgaggaggaggtgtccgtgcctacctcgaacact
gcccccgcagactccaaggctgcaactagcgccccagcgggtgatgccgacgaaggcaag
aagggaagctacgtgggtattcattctacgggtttccgtgactttctgctgaagcctgag
ctgctgcgtgccattagtgatctgggctttgagcacccgtcggaagtgcagcaggagtgc
attccgcagtcgattctcggtatggacgttgtgtgtcaagccaagtctggtatgggtaag
accgctgtgttcgtacttgcgacactgcagcagctcgagcccgtcgatggcgaggtgtct
gtgattgtcctctgccatacacgcgagctggcgtaccagatccgtaacgaatacgcccgc
tttaccaagtacatgcccgaggtgcgcacctcggtcgtgtacggtggtacgccgatcaag
gaggaccaggctatgcttgccgacaaggccaagtgcccccacatccttgttggcactcct
ggccgtatgaacggtctggtgcgggacaagtcgctcaaggcgggtgaagtgaaacacttt
gtcttggatgagtgcgataaaatgttggataaccttgagatgcgccgcgatgtgcaggag
atcttccgtgctacgcctcatcacaagcaggtcatgatgttcagtgcgacgctcgcgaag
gaaattcgccctacctgcaagaagttcatgcagaaccctctggagatctacgtggacgac
gagaccaagcttactctccatggtctgcagcaatactatgtgcgtctggaggaggccgcg
aagaaccgcaagctcaacgacctgctcgacacgctcgagttcaaccaggtaattattttc
gtcaagtcgatctcgcgcgcaaaccagttggaccagctgttgcgtgagtgcaacttcccc
tcgatttgcattcacggtggccttccacaggacgagcgcattaagcgctaccagcagttc
aagaactttgaaaagcgtatcctcgttgctacggatatcttcggccgtggtatcgatgtg
gagcgtgtgaacgtgtcgatcagctacgacacaccgtccgatgcggactcgtacttgcac
cgtgttggtcgtgcgggtcgtttcggtacgaagggtcttgccatcacgttcgtttcaagc
gacgaggatgccgaggtgctcaagcagatccagagccgcttcgaggtggccgtacctgag
ctgcccgacaccatcgaggctagcacgtacatgaacgcgtag

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