KEGG   Malassezia sympodialis: MSY001_3030
Entry
MSY001_3030       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12586  exosome complex component RRP43
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_3030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_3030
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MSY001_3030
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 30057915
NCBI-ProteinID: XP_018741529
LinkDB
Position
Unknown
AA seq 340 aa
MTEVASGADAAPMTTFKKLYPAEYLQRHLEQRVREDGRAFTDGRPASVAVGTLSHARGSA
LVRWGQSTMVVAGVHAQLCKPAYERPNEGFLVPTVDLSPLCSPQYKAGPPSEDAQVMAHQ
LQMFLNASNILPRSSLCIEEGVAVWSIFVDVVCLSADGSVLDAAALAAVAALHQCRLPVP
RSVPSVDQAVFDAHDTQPLALHGMPILATFGVHDSTYLLADMTAFEESLAMGRLHLGLVD
GADSEEAFWIKVLGHCAVREPRELAFPELVQFCLEHAQRRAAQLRALLRDAAFAQEAHAR
ARAIPFEEGRMPLDETNHEGAPCGMSRGQELCEWLHVLRL
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgactgaggtcgccagtggcgcggatgctgcgcccatgaccacgttcaagaagctctat
ccggctgagtacctgcagcggcatttagaacagcgtgtgcgtgaggatggacgggcgttc
acggatgggcgtcccgcatcggtggccgtcggcacgctgtcgcatgcgcggggcagcgcg
ctggtgcgctgggggcagagcacgatggtggtagcaggcgttcatgcgcagctgtgcaag
cccgcgtacgaacgcccaaatgaggggtttctcgtgccaaccgtggacctctcgccgctg
tgctcgccgcagtacaaggcgggcccgcccagcgaagacgcgcaagtcatggcgcaccag
ctacagatgtttctcaatgcatccaacattctcccgcgctcgtcgctatgtattgaggag
ggcgtagcggtctggagtatctttgtcgatgtggtatgtctgagcgccgatggctcggtg
ctggatgctgccgcgcttgcggcggtcgccgcgctgcaccaatgtcgactccctgtgcct
cgcagcgtaccgtccgtggaccaagctgtatttgatgcgcatgatacccagcccctcgcg
ctccatggcatgcccattctcgcgacatttggcgtacatgattctacctacctgcttgcg
gatatgacagccttcgaagagtcgctcgcaatgggtcgtctccatctcgggcttgtcgac
ggcgccgacagtgaggaagcgttttggatcaaggtgctcgggcactgtgccgtgcgcgag
ccgcgcgagctggcgttccccgagctcgtgcagttctgcctcgaacacgcacagcggcgc
gctgcccagctgcgtgcactcctgcgcgatgccgcgttcgcacaggaggcacacgcgcgc
gccagagcgattccctttgaggaaggccgcatgccgctcgacgagacgaatcatgagggt
gcgccgtgcgggatgagccgtggtcaagagctgtgtgagtggcttcacgtacttcggtta
tga

DBGET integrated database retrieval system