KEGG   Malassezia sympodialis: MSY001_3084
Entry
MSY001_3084       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
msym  Malassezia sympodialis
Pathway
msym03020  RNA polymerase
msym03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MSY001_3084
  09124 Replication and repair
   03420 Nucleotide excision repair
    MSY001_3084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msym03021]
    MSY001_3084
   03400 DNA repair and recombination proteins [BR:msym03400]
    MSY001_3084
Transcription machinery [BR:msym03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     MSY001_3084
  RNA polymerase III system
   RNA polymerase III
     MSY001_3084
  RNA polymerase I system
   RNA polymerase I
     MSY001_3084
DNA repair and recombination proteins [BR:msym03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MSY001_3084
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 30057969
NCBI-ProteinID: XP_018741578
UniProt: M5ED55
LinkDB
Position
Unknown
AA seq 149 aa
MSANSLFDTQFVIKEIDPDGKKFDRVSRIVAHSPTLDMTLSIDIATDIYPVHVGQSLAFQ
LVSSLRREKADAEADAAADHDAWRLDTDDTSLAKDFDYVMYGKIFKYDERSAEQVTVYGS
FGGLLMALTGSFRHLSKITVGAHVYLLVR
NT seq 450 nt   +upstreamnt  +downstreamnt
atgagtgccaacagtttgttcgacacgcagtttgtgatcaaggagattgatccagacggc
aaaaagttcgaccgagtctcgcgcattgtcgcgcactcgcccacgctcgacatgacgctg
tcgatcgatatcgctacggacatctaccctgtgcacgtgggccagtcgctcgcgttccag
ctcgtgtcgtcgctgcgccgcgagaaggccgatgcagaggcggacgcagcggcggaccac
gacgcctggcgcctcgatacagacgacacatcgctggcgaaggactttgactatgtcatg
tacggcaagattttcaagtacgacgagcgcagtgcggagcaggtcacggtctacggctcg
ttcggcggcctgcttatggcgctcaccggctcgttccgccacctcagcaagatcaccgtc
ggcgcccatgtctacctgctcgtccgctag

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