KEGG   Malassezia sympodialis: MSY001_3111
Entry
MSY001_3111       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
msym03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MSY001_3111
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_3111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_3111
   03041 Spliceosome [BR:msym03041]
    MSY001_3111
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MSY001_3111
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MSY001_3111
Spliceosome [BR:msym03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MSY001_3111
SSDB
Motif
Pfam: LSM KOW7_SPT5
Other DBs
NCBI-GeneID: 30057996
NCBI-ProteinID: XP_018741604
LinkDB
Position
Unknown
AA seq 77 aa
MSGATILPLELVDRCIGSRIWVVMKSEREFVGTLLGFDDYVSPSAHTSEGTSDGYKKTPL
AKTLLNGNNICAVRRAY
NT seq 234 nt   +upstreamnt  +downstreamnt
atgtcgggtgcgaccattctgccgctcgagcttgtcgaccggtgcattgggagccgcatc
tgggtcgtgatgaagagtgagcgtgagtttgtgggcacgctcctgggcttcgacgactac
gtcagtccatctgctcacaccagcgagggaacatccgacggctacaagaaaacgccgctg
gccaagacgctgctgaacggcaacaacatctgcgcggtacgtcgtgcctactga

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