Malassezia sympodialis: MSY001_3179
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Entry
MSY001_3179 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
msym
Malassezia sympodialis
Pathway
msym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSY001_3179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_3179
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
MSY001_3179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
30058064
NCBI-ProteinID:
XP_018741669
UniProt:
M5ERL7
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MEERLQEVSRALSAATQTAALLPDATDLDFHSSIDPSFKRALGRVSEGLGALIHGMSGWI
EAPIGDASVDDVLQPSRFSAAVGDAIDRLLEQTDIYLDEYAGRRPVAAPAADAASASIPA
KGKLPRHLLQANIPRPQDKFTTRPDNRADTPWSRPLRRGKPNAQVPLGYRDPAWDITESS
RVVGQYGVEGDARLNPYYVEIQQTPPPLHSLRPPEPEAPRPLEMDMPDSSAPCPFVWVDS
LEKLEALAAHLEEERVQEIAVDLEHHSLRSYAGMVSLAQISTRWGDWIVDTLVDEVRENM
EMLNTSFTHPSKVLVLHGADHDVLWLQRDLGLYVTNLFDTFHASKLLQFGANSLAYLLLR
YLDFEADKRFQTADWRIRPLPNEMLFYARSDTHSLLYVYDRLREELLAHGGPVSVKEVFE
RSKGTASKVYAKEAWDPVGDSRSGWRTLWLKMGGDLARASQDALPGTPMGREERLVRRLH
QWRDAVAREEDESPHYVMPPQVLVSLAFRPPSTVQEAAARIPKNLAVAQRRLDGLVQVVA
DEQAAYQSEAQERVQSAGGDAWDVDEEDVGEIVQEIRPSTPAPAEAPKAVQQGRLDTESS
LADVRVWEQPAPEAVHDGARLFRGLKTSAAEATKPAKKRQSLFAKAKPEEKPVESTLQRI
RAECVQWLGGLFGQTVGVPASKPEATEPVEVAANPAWEAPSTSQTTKRKASPELEATPAN
DDDDVDAIVPVAKHPKSQPGLQARKESAAASVPEFDYGNAASMLTAPRAPPGRSLLRAAG
STSAKGSKAPKQKSNARSGNRSGTFGGRRAGPR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcggctgcaggaggtgagccgcgctctgagtgcagcgacacagacggcggcg
ctccttcctgatgcgacggacctggacttccacagttccattgacccgtcattcaagcgc
gccttgggccgtgtgtcggagggcctcggtgcgctgatccatggcatgagcgggtggatt
gaggcgcccatcggcgatgcgtcggtcgacgatgtgctccagccgagtcggttctctgcg
gcggtcggcgacgccattgaccgtcttctcgagcagacggacatatatctggatgagtat
gcggggcggcggcccgtggcggcccctgcggcggacgcagcaagtgcctccattcccgcc
aagggcaagcttccgcggcaccttttgcaagccaacataccgcgtccgcaggacaagttc
acgacgcgcccagacaatcgcgctgatacgccatggagtaggcccttgcggcgtggcaag
ccgaatgcgcaagtgccgctgggctaccgcgatccagcgtgggacattacggagtcgtcg
cgcgtggtcgggcagtacggcgtcgagggagatgcgcggctgaacccgtactatgttgag
atccaacagacgccgccgccgctgcattcgctgcggccgccggagcctgaggcgccgagg
cccctggagatggacatgcctgactcgagcgctccgtgtccgtttgtgtgggtggacagc
cttgagaagcttgaagcgctcgcggcgcatttggaggaggagcgtgtgcaggagattgcc
gtggacttggaacaccacagcctgcgctcctatgccggaatggtctccctggcgcagatc
agcacgcgatggggcgactggattgtggatacgctcgtggatgaggtgcgggagaatatg
gaaatgctcaatacatcgtttacgcacccgtccaaggtgctcgtgctgcatggtgcagac
catgatgtgctgtggctgcagcgcgatctgggcctctatgtgacgaacctctttgatacg
ttccacgcctcgaagctgctgcagtttggcgcaaatagcctggcatacctgctgctgcgg
tacctggattttgaggccgacaagcggttccagacggccgactggcggattaggccgctt
ccaaacgagatgctgttctatgcgcgcagcgatacacattcgctcttgtacgtgtacgat
cgcttgcgcgaggagctgcttgcgcatggcggaccagtctccgtgaaggaggtctttgag
cgcagcaagggcacggcctccaaagtgtacgcaaaagaggcgtgggaccccgtcggcgat
tcccgctcgggctggcgcacgctgtggctcaagatgggcggcgaccttgcgcgtgcatcg
caggatgcgctccctggcacgccaatgggacgcgaggagcgactggtgcgccggctgcat
cagtggcgcgatgcggtggcgcgcgaggaagacgagagtccacactatgtcatgcccccg
caggttctcgtcagcctggcttttcggccgccatcgaccgtacaggaggccgcagcgcgc
attcccaagaacttggcggtggcacagcgccgcttggacgggctggtccaggtggtggcc
gatgagcaggcggcgtaccagtcggaagcgcaggagcgcgtgcagagtgctggcggcgat
gcatgggacgtggatgaggaggatgtgggcgaaatcgtgcaggagatacggccgtctacg
ccggcgccggccgaggcgcccaaggcggtccagcagggccgcctagacacggagtcgtcg
cttgcggatgtgcgcgtgtgggagcagccggctccagaggccgtgcatgacggagcgcgg
ctcttccgcggcctgaagacgtcggcggctgaggcgaccaagcccgcgaagaagcgccag
tcgctctttgcgaaggctaagcccgaagagaagcccgtcgaaagtacgctgcagcgcatc
cgtgccgaatgcgtccagtggctgggtggcctgtttggccaaacggtgggcgtccccgcg
tccaagccggaagcgaccgagcccgtcgaggtcgcggcgaatccggcctgggaggcgccg
agcacgagtcagacgacgaagcgcaaggctagtccagagctagaggcgacgcctgcgaat
gacgacgacgatgtcgacgccatcgtgcccgtggccaagcaccctaagagccagccaggt
ctgcaagcgcggaaagagtctgctgcggcgtcggtgccagagtttgactatggcaatgcc
gcgtccatgctgacggcgccgcgtgcgccgcctggaagatcgctgctgcgtgcagccggc
agcacgtcggcgaaagggagcaaggcgccgaagcaaaagtcgaatgcccgcagtggcaac
cgcagcgggacatttgggggccgccgagcggggccgcggtaa
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