Malassezia sympodialis: MSY001_3335
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Entry
MSY001_3335 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
msym
Malassezia sympodialis
Pathway
msym03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSY001_3335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_3335
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MSY001_3335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup192
Motif
Other DBs
NCBI-GeneID:
30058220
NCBI-ProteinID:
XP_018741814
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MAGAASAAPDAARDPPSHTLMYVSFYEIYEHLERARQTCAPADLQRLLEARLAQLRDCGA
AWASPSAASRAALQKDAVTWRGHTVQLDDTVRGLGLALSDRLHLDEIEAAALLRTYLASE
HRTLDARDSEPGSERFEALVDAVFVFFLEEQLALIRCVSALLRIAEDAHNELFDMASAVL
DALADDALAHRCLTWFEHASTHSLAAPFAADPRLERQLALLEVAFLLYYGRLPPTMAFAD
ALLGTIERTHFGQRQASAGFFDDSARGLLRSVRELLVFLAIECLNLEAALEAPPAGALAD
DAALAPLAADPAHLDAALRRLEAHAASDAAYAPLLLGLALVLRRLDEYAAAGGAVDDALA
RTVDVLDLGPPMWQRLAQGAFDPGMELLPTLHALVSSPLLGTSAHVFGAANLSALAYRAV
FKGLLLTVSELVQPEYLPDLDALVDLWYGTFRDASGDVADGAAALCLQFWTQDLPYPTRT
SVLDTARRRFPASLRPLVRLARALSGTAPEVPAPDTAASAADLLMHLPTLALVMPPRAAA
LAPWQPVTEPTAPSVQYELRTPLPVAATRLVIPAGTRGTLVSPPDEAPAVVLWQLPAPVS
AWHVLHDTLAYRERPPARTGAHPLLDDGARAPPTALSPDWDDAPLVATETAELFADMLSA
DDALGDALLEHLGADMALVPSALRLVQEGLAAHPVHERQVCAGYHLLQALLPLRPNDVWQ
HVRSTNVLVGSPGPAPLVDDAHDLPPSPLVAHGAWRGALALLSLLAALLAQMQAAQCVDP
HNLVHIKARVLARACTWAADTVWVEPMAPPDAQASLVLACLRLWDAVLRDPCLEEDKAAA
PLVAVVERVLGDAATPLTLRPLLSALDATERTDAALAAQALRTARTLVTRPARAHPIRAC
FLGTAPEARGSLVSAVLAHVAAAVPPAMATAAAQLVTDVVRTSEASAFRWAGHLGSTAHV
DRTVRGHLQLLSADHTDGDLRAAVWRMLAALLASQPALATLLLTGGQEAGGHTKAGDAPT
ALQLAAATVRDADLWTRAPDVLEAVLFFLYEAWGHALAHPRVFAALRKDAALFDALGALL
RRPTPFPLDDAPADETTAYAHRAVCQARVLQVLELDVQALGHSASDGAGSGASAGAAAPE
GGLRVLRAWLLDVPAACEALGAAMDTVSTHAVRAQEAALAALLPHVPLAALRLPPRRDDY
DQCRTFGPAYMYAMPALAARVPPGVPEAEACAARVGLAWSALDAQAQRAHAWANVLRAAL
PYLLAGADAAPLQRALSALAQRLAPLAAADERCHVLRLWAALLGATHARLEAPAARAMAE
ALAHTLDVPAYALPAALSESASAEARTPLLECMLAVILAVRRLGEPVAALSAVMAHAMHV
LARLDALAPLLDVPSSEAARRAEYDLDVLVAVVQAGMACVPPSVWLHPLRETSVLRGVRY
LLAHAPLAAAGEWAGAPRTHVRFFAPLVRLLEALAAQPAACELLAHAGIVRALGTHALSA
ALEDGCMDATLPSGEPSPMHAAWLLVLRTVVRIVENVGAEARAHLVDADVDAFVHMCGGQ
LRRALAWAPLTHARRLDVAELHEVRTTLRLFHGMWAAKAPRASQDTPRAHARAHVPLGDV
LAEHAPRLLPSLAYLATHAAELRAWLGLEAEGADALARAAQVAVDEALGLLLALLWALSS
ADLVLTHEPAAWPQLPALIAPTLHVAPGAPASLGTLLELASTLTARSRRGEGRMHEALEQ
CIGLCATQALIWAKAPAPPGAQAAWQVQVDQAHAEVAAGLGRDLVAAVQAADEANHSAWW
DVLRALEQRYMARRYA
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgcagccagcgcggcgccggacgctgcgcgcgatcccccgtcccatacgctg
atgtatgtatcgttttacgagatctacgagcatctcgagcgtgcgcgccagacgtgcgcg
cctgcggatctccagcgcctgctcgaggcgcgcctcgcgcagctgcgcgactgtggcgcg
gcgtgggcgtcgccgagtgcagcgtcgcgcgccgcgctccaaaaagacgcggtgacgtgg
cgtgggcacaccgtccagctggacgacacggtgcgcgggctgggtctcgcgctcagtgac
cgcctgcacctcgacgagatcgaggccgcggcgctcctgcgcacctacctcgcgagcgag
caccgcacactcgacgcgcgcgacagcgagccgggctcggagcgcttcgaggccctcgtg
gatgccgtgtttgtcttttttctcgaggagcagctcgcgctcatccgctgcgtcagcgcg
cttctgcgcatcgccgaggacgcccacaacgagctgttcgacatggcgtcggcggtcctg
gacgcgctcgccgacgatgcgctcgcgcaccgctgcctcacatggttcgagcacgcgtcg
acccactcgctggccgcgccgttcgcggcggatccgcgcctcgagcgccagcttgcgctc
ctagaggtcgcgttcctgctctactacgggcgcctgccgcccacgatggcctttgcggac
gcgctcctcggcacgatcgagcgcacgcactttggccagcgccaggcgagcgccgggttc
ttcgacgacagcgcccgcggcctgctgcgcagtgtgcgggagctgctcgtgtttctggcg
atcgagtgtcttaacctcgaggccgcgctggaggcgccgccggccggcgccctcgccgac
gacgcagcgcttgcgccactcgccgcggacccggcgcacctcgacgcggcgctccgccgc
ctcgaggcgcacgccgcgtcggacgcggcgtatgcgcccctgctcctcggtctcgcgctc
gtgctccgccgcctcgacgagtacgcggccgccggcggcgcggtcgacgacgcactcgca
cgcaccgtcgatgtgctcgacctgggcccgcccatgtggcagcgcctcgcgcagggcgcc
tttgatcccggcatggagctgctgccgacgctgcacgcgctcgtatcgtcgccgctcctc
ggcacgtccgcgcatgtgtttggcgccgcgaacctgagcgccctggcgtaccgcgccgtg
ttcaaagggctcctcctcaccgtgtcggagctcgtgcagcccgagtacctgccggacctc
gacgcgctcgtcgacctgtggtacggcaccttccgcgacgcgtccggcgacgtggccgat
ggcgccgcggccctgtgcctccagttctggacgcaggacctgccgtaccccacgcgcacg
agcgtcctcgacacggcgcgccgccgcttcccggcgtcgctgcgcccgctcgtgcgactc
gcgcgcgcgctcagcggcacggcgcccgaggtgccggcgcccgacacggccgcctcggcg
gccgatctactgatgcacctgccgacgctcgccctggtgatgccgccgcgcgccgccgcg
ctggcgccgtggcagcccgtgacggagcccacggcgcccagcgtccagtacgagctgcgc
acgccgctgcccgtggctgcgacgcgcctcgtgatcccagccggcacgcgcggcacgctc
gtctcgccgccggacgaggcgccagccgtcgtgctctggcagctcccagcgccggtgagt
gcgtggcatgtgctgcacgatacgctggcgtatcgggagcggccgcccgcccgcaccggc
gcgcatcccctcctcgacgacggcgcgcgcgcgccgccgacggcgctgtcccccgactgg
gacgacgcgccgctcgtggccaccgagacggccgagctgttcgccgatatgctgagcgcc
gacgatgcgctcggcgatgcgctgctcgagcacctcggggcggacatggcgctcgtgccg
agtgccctgcgcctcgtgcaggagggcctcgcagcgcaccccgtccacgagcgccaggtg
tgtgccggctaccaccttctgcaggcgctcctgccgctgcgcccgaacgacgtgtggcag
catgtgcgcagcacgaacgtgctcgtcggcagccccggccccgcgccgctcgtcgacgac
gcgcacgacctgccgccgtcgccgctcgtcgcgcacggcgcgtggcgcggcgcactggcc
ctgctgagcctgctcgcagcgctcctcgcgcagatgcaggcggcgcagtgtgtcgatccc
cacaacctcgtgcacatcaaggcgcgcgtgcttgcgcgcgcctgcacatgggccgccgac
acggtgtgggtcgagccgatggcgccgccggacgcgcaggcgtcgctcgtcctcgcgtgc
ctgcgcctctgggacgccgtcctccgcgacccgtgcctggaggaggacaaggccgccgct
ccgcttgtcgctgtcgttgagcgcgtgctcggcgacgcagcgacgcccctcacactccgg
cccctgctctccgcgctggacgccacggagcgcaccgacgctgcgctcgcggcgcaggcg
ctccgcacggcccgaacgctcgtcacgcgcccggcccgtgcgcatccgatccgcgcgtgc
ttcctaggcacggcgcccgaggcgcgcggctcgcttgtgagcgcggtgctcgcgcatgtg
gcggcggccgtgccgcccgccatggccacggccgccgcgcagctcgtgacggatgtggtg
cgcacgtccgaggcgtctgcgttccgctgggccgggcacctcggctcgacagcgcacgtc
gaccggacggtgcgtggccacctgcagctgctctcggcagaccacaccgacggcgatctc
cgtgcggcggtgtggcgcatgctcgcagcgctcctggcgtcgcagcctgcgctcgcgacg
ctgctgctcaccggcggccaggaggcgggcggccacacgaaggcgggcgacgcgccgacg
gcgctgcagctggccgcggcgaccgtgcgcgacgcggacctgtggacacgtgcgccggac
gtgctcgaggcggtgctcttcttcctctacgaggcatgggggcatgcgctcgcgcacccc
cgtgtctttgcggcgctgcgcaaagacgcggcgctcttcgacgcgctgggcgcgctgctg
cgccgccccacgccgttccccttggacgacgcgccggccgacgagacgaccgcgtacgcg
caccgcgccgtgtgccaggcgcgtgtgctgcaggtgctcgagctcgatgtgcaggcgctc
gggcacagtgcgtctgacggcgcgggctcgggcgcgagtgcgggcgccgcggcgcctgag
ggcggcctgcgcgtgctgcgcgcgtggctgctcgacgtgcccgcggcgtgcgaggcgctc
ggcgctgcgatggacaccgtgtcgacgcacgcggtgcgcgcgcaggaggcggcgctggcg
gcgctccttccgcatgtgccgctcgcggccctgcgcctgccgccgcgccgcgacgactac
gaccagtgccgcacgtttgggccggcgtacatgtatgcgatgcctgcgctcgcggcgcgc
gtgccgccgggcgtcccggaggccgaggcgtgcgcggcgcgcgtgggcctcgcgtggtcc
gcgctcgatgcgcaggcgcagcgcgcgcatgcgtgggcgaatgtgctgcgcgccgcgctg
ccctacctgctcgctggcgcggacgctgcgccgctgcagcgtgcgctgagcgcgctggcg
cagcgcctcgcgccgctcgcggcggcggacgagcgatgtcacgtgctgcgcctgtgggcg
gcgctgctcggcgcgacacacgcgcgcctcgaggcgcctgcggcgcgtgcgatggcggag
gcgctcgcgcacacgctggatgtgcctgcgtatgcgcttcctgcggcgctgtccgagtcc
gcgagcgccgaggcgcgcacgccgctgctcgagtgcatgcttgcggtcatcctcgcggtg
cgccgcctcggcgagccggtggcggcgctctcggcggtgatggcgcatgcgatgcatgtg
ctcgcgcgcctcgatgcgcttgcgcccctgctggatgtgccgtcgagtgaggccgcgcgc
cgcgcagagtacgatctggatgtgcttgtggcggtcgtgcaggcgggcatggcgtgtgtg
cccccgagtgtgtggctccatccgctgcgcgagacgtccgtgctgcgtggtgtgcgctac
ctgctcgcgcacgcgccgctcgcggcggccggcgagtgggccggcgcgccgcgcacgcat
gtgcgcttctttgcgccgctggtgcgcctgctcgaggcgctggcggcgcagcctgcggca
tgcgagctgctcgcgcacgcaggcatcgtgcgtgcgctcggcacgcacgccctgagtgcg
gcgctcgaggacgggtgcatggacgcgacgctgccgtccggcgagccgagtccgatgcac
gcggcgtggctgctcgtgctgcgcaccgtcgtgcgcatcgtggagaatgtgggcgccgag
gcacgcgcgcacctcgtggacgcggacgtcgatgcgttcgtgcacatgtgtggcggccag
ctgcgccgcgcgctcgcgtgggcgccgctcacgcacgcccggcgcctggacgtggcggag
ctgcacgaggtgcgcacgacactccgcctcttccacggcatgtgggcggccaaggcgccg
cgcgcctcgcaggacacgccgcgcgcgcacgcgcgcgcgcacgtcccgctcggcgacgtg
cttgcggagcacgcgccgcgtctgctgccgtcgctcgcgtacctcgcgacgcatgcggcg
gagctgcgcgcgtggctcggcctcgaggccgagggggccgacgcgcttgcgcgcgccgcg
caggtggccgtcgacgaggcgctgggcctgctgctcgcgctgctgtgggcgctcagcagc
gcggacctcgtgctcacgcacgagccggccgcgtggccgcagctccccgcgctcattgcg
ccgacgctgcatgtggcgcccggggcgcctgcgtcgctcggcacgctcctcgagctggcg
agcacactgacggcgcgcagccgccgcggcgaggggcgcatgcacgaggcgctcgagcag
tgcatcgggctgtgtgcgacgcaagcgctgatctgggccaaggcgccggcgccgcccggc
gctcaggccgcctggcaggtgcaggtggaccaggcgcatgccgaggtcgccgcggggctc
gggcgcgacctggtggccgcggtccaggcggcggacgaggcgaatcacagcgcgtggtgg
gacgtgctgcgggcgctcgagcagcggtacatggcgcgccgctatgcatag
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