Malassezia sympodialis: MSY001_3410
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Entry
MSY001_3410 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
msym
Malassezia sympodialis
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msym03009
]
MSY001_3410
Ribosome biogenesis [BR:
msym03009
]
Eukaryotic type
90S particles
Other 90S particles
MSY001_3410
Pre-60S particles
Other pre-60S particles
MSY001_3410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Motif
Other DBs
NCBI-GeneID:
30058294
NCBI-ProteinID:
XP_018741883
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MAEAASVAERRAGLEQALARIRHHTTSKLENQRAPAQLLAAIEATLAERAAADATEEAGG
PTAYLLALESLLGAESVTPDVHASAVYLLATVLPHVAPGVVRAKSVALLSAVAAPLAEPH
GASEHMNARIRAALGVVEALLEHVPPHDRTTLERERTWTTVWDLVLALCIDARPKVRRRA
HELVAHVLGLPAWKHNHPYAARTMRWAAQTLERVAAARGVASTKTRIDYDKKSGQAKNAK
RAALERQQSAADGAASTGIWVSALLQMLVPFVPVDATAPLVPALLALPALSNPFLTLAVY
DVFAALFRAPVQRSALDAIDEAPRRDATLVRQTIQALREPAHVPAHTDVQTLPAYLRVLE
SCMVAYSAADPAAAWAATPALWADVLHVGLSAHSDAARASADVRLAARSLLQGLARYCVT
DAAVAAALDGASAPLSTLIASLRDALGAHALTYTQARGDVLQVLASLVTRLRVPLEAGAA
PPAVPLLLDTVEQVAALRTQRHFDARAEADAVLGAAIAACGPRAVLARLPLQLLDGGRPA
THGRGRAWLLPLLRAHTTNTELAHFVDEFVPLSEALFELRVQAEQPSDGSAARPVEAKVM
EALIEQIWACFPGYCDLARDVDVALTPAVLELLVQVLRTQRALRPAVLQGLALLVQRTES
LIASHAPPAQLRREVGVDQADGQRFLAHLRQLAAPLLAALFQLLAELPSQARGPVMECMG
VYLAILDAPSVAAAFGQVRAMLEQSLQTYVPSAPAPGQPEANSPRYVPPVPHTMLDLCVA
LVPYVRGAEARALFDLASSVLPKADGGLQKKAYRVLGRLLRGSEAPALRAHYGVSALLRA
WAALDVQPGAVRDRLQLLEALVAHVPPAELGVLSALVPEAVLGTKEANQGARGAAYELLV
QMGHRLQAGGTIDRAQAGVADGVVEASANEFVMMVVAGLAGASPHMMGATIAALARLLYE
FAAVLPAETVSELLATMLVFLESTNREIIKGALGFCKVALVVLPPASVEAALPTLVPALM
QVQNVHKNHFKGRVRHMLERLLRRYGEAAVRAHVGEEHQRLITHIRKRKERARRRRAQEA
DEAATEAAKPRDLGTDAFEEALYGSASESDDEPDDEPAARPRRARQRHREDDTYLVEDDD
MPVDLLGEQATTVRPRARAARRQPGEEARTFETDEAGRLRIPGDEAAAEAAAPADDVDAQ
AGDAYLAKSRGVDGYTVGRGGAVKFNKNTKRTRASEREDDDDEAPAPSEARRRPKRSKQA
IGAEFKARPRTRMCRCRL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagccagcgttgcggagcgccgtgcgggcctcgagcaggccctcgcgcgc
atccgccaccacacgacatccaagctggagaaccagcgcgcgcctgcgcagctgctcgcc
gcgatcgaggcgacactcgcggagcgcgcggccgccgacgccaccgaggaggcgggcgga
ccgaccgcctacctcctcgcactcgagagcctgctcggcgccgagtcggtcacaccggat
gtgcacgcatccgccgtgtacctgctcgcaaccgtgctgccgcacgtcgcgccgggcgtc
gtgcgtgccaagagcgtggcactgctgagcgccgtcgctgcgccactcgccgagccgcac
ggcgccagcgagcacatgaacgcgcgcatccgcgcggcgctcggcgtcgtcgaggcgctc
ctcgagcatgtgccgccgcacgaccgcacgacgctcgagcgcgagcgcacgtggacgacg
gtgtgggacctcgtgctggcgctgtgcatcgacgcgcgcccgaaggtgcgccgccgcgcg
cacgagctcgtcgcgcatgtgctgggcctccccgcatggaagcacaaccacccgtacgcc
gcgcgcacgatgcgctgggcggcgcagacgctcgagcgcgtcgcggccgcgcgcggcgtg
gcctcgaccaagacacgcatcgactacgacaagaagagcgggcaggcgaagaatgccaag
cgcgccgcgctcgagcgccagcagagcgccgccgacggcgcagcgagcacgggcatctgg
gtgtcggcgctcctgcagatgctcgtccccttcgtgcccgtggacgccacggcgccgctc
gtgcccgcgctgctcgcgctgcccgcgctgtcgaacccgttcctgacgctcgccgtgtac
gacgtcttcgccgcgctcttccgcgcgcccgtgcagaggagcgcgctcgacgccatcgac
gaggcgccgcggcgcgacgctaccctcgtgcgccagacgattcaggccctgcgcgagccg
gcgcatgtgcccgcgcacaccgacgtgcagacgctccccgcgtacctgcgcgtgctcgag
tcgtgcatggtcgcctactcggcggccgatccggcggccgcgtgggccgcgacgcccgcg
ctgtgggcggacgtgctgcacgtcggcctgtcggcgcactcggacgcggcgcgtgcgtcg
gcggacgtgcgcctggccgcgcgctcgctgctccagggcctcgcgcgctactgcgtcacg
gacgcggccgtggccgcggcgctggacggggcgtcggcgccgctctcgacgctgatcgcg
tctctgcgcgacgcgctcggcgcgcatgcgctcacgtacacacaggcgcgcggggacgtg
ctgcaggtgctcgcgagcctcgtgacgcggctgcgcgtgccgctcgaggccggcgcggcg
ccgccggccgtgccgctgctcctcgacacggtcgagcaggtcgccgcgctgcgcacgcag
cggcactttgacgcgcgcgcggaggcggatgctgtgctgggcgcggcgatcgccgcgtgc
gggccgcgcgcggtgctcgcgcgcctgccgctgcagctgctcgacgggggccgccctgcg
acgcatggacgaggccgtgcgtggctgctgccgctgctgcgcgcgcacacgacgaacacg
gagctcgcgcactttgtggacgagtttgtgccgctgagtgaggcgctcttcgagctgcgc
gtgcaggcggagcagccgtcggacggcagcgcggcgcgcccggtggaagccaaggtgatg
gaggcgctgatcgagcagatctgggcgtgcttcccgggctactgcgacctggcgcgcgac
gtggacgtggcgctgacgccggcggtgctcgagctgctcgtgcaggtgctgcgcacgcag
cgcgcgctgcgcccggcggtgctgcagggtctcgcgctgctggtgcagcgcaccgagtcg
ctgatcgcctcgcatgcgccgcctgcgcagctgcggcgcgaggtcggcgtggaccaggcg
gacgggcagcgcttcctcgcgcacctgcggcagctggccgcgccgctgctcgccgcgctc
ttccagctgctggccgagctgccgtcgcaggcgcgcggcccggtgatggagtgcatgggc
gtgtatctggcgatcctcgatgcgccgagcgtcgccgcggcgtttggccaggtgcgtgcg
atgctcgagcagtcgctgcagacgtacgtgccgtcggcgcctgcgcctgggcagcccgag
gcgaacagtccgcggtacgtgccgccggtgccgcacacgatgctggacctgtgcgtggcg
ctcgtgccgtacgtgcgtggcgccgaggcgcgcgcgctctttgatctggcgtcgagcgtg
ctgcccaaggccgacggcggcctgcagaagaaggcgtaccgcgtgctcggccgcctcctg
cggggcagcgaggcgccggcgctgcgcgcgcactatggcgtgtcggcgctcctgcgggcg
tgggccgcgctcgacgtgcagccgggcgcggtgcgcgaccggctgcagctgctcgaggcg
ctcgtggcgcatgtgccgccggccgagctcggtgtgctcagcgcgctggtgcccgaggcg
gtgctggggacgaaggaggcgaaccagggcgcgcgcggcgcggcgtacgagctgctcgtg
cagatgggccaccgcctgcaggcgggcggtacgatcgaccgggcgcaggcgggcgtcgcg
gacggcgtcgtcgaggcgtctgcgaacgagttcgtgatgatggtcgtcgcgggcctggcc
ggcgcgagcccgcacatgatgggcgcgacgatcgcggcgctcgcgcgtctgctgtacgag
tttgccgcggtgctgccggccgagacggtgtcggagctgctggcgacgatgctcgtgttc
ctcgagagcacgaaccgcgagatcatcaagggcgcgctgggcttctgcaaggtcgcgctc
gtcgtgctgccgccggcgtcggtcgaggcggcgctgccgacgctcgtgcccgcgctgatg
caggtgcagaacgtgcacaagaaccacttcaaggggcgtgtgcgccacatgctcgagcgc
ctcttgcgccggtatggcgaggcggcggtgcgcgcgcacgtcggcgaggagcaccagcgg
ctgatcacgcatatccgcaagcgcaaggagcgcgcgcggcgccgccgcgcgcaggaggcc
gacgaggcggcgaccgaggcggccaagccgcgtgatctcggcaccgacgcgttcgaggag
gcgctgtacggcagtgcgtccgagtcggacgacgagccggacgacgagccggcggcgcgc
ccgcggcgcgcgcgccagcgccaccgcgaggacgacacgtacctcgtggaagacgacgac
atgccggtggacctgctgggcgagcaggcgacgacggtgcgtccgcgcgcgcgcgcggcg
cggcggcagccgggcgaggaggcgcggacgtttgagacggacgaggcggggcgtctgcgc
atccccggcgacgaggcggcggcggaggcggcggcgccggccgacgacgtggacgcgcag
gcgggcgacgcgtacctggccaagtcgcggggtgtggacggctatacggtgggccgcggc
ggcgcggtgaagttcaacaagaacacgaagcggacgcgcgcgagcgagcgcgaggacgac
gacgacgaggcgcccgcgccgagcgaagcgcgccgccggccgaagcgcagcaagcaggcg
atcggtgccgagttcaaggcgcgcccccgtacgcgtatgtgccgctgtcgtctgtga
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