Malassezia sympodialis: MSY001_3448
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Entry
MSY001_3448 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K03679
exosome complex component RRP4
Organism
msym
Malassezia sympodialis
Pathway
msym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSY001_3448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_3448
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MSY001_3448
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MSY001_3448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
30058332
NCBI-ProteinID:
XP_018741919
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MALAETPFRLVRAQRGGAVSAYTHASGSETRNFDIMGVADDAMDEEGEQDTGLLAMPGQG
VATSLKYMRGHGCYLDASQAEIVSSLSGTIEKVNKLVSVRPVRTRYRPEVGDLVIGRITD
VQSRRWKVDIGAKTDASLQLSSINLPGGVQRKKLESDELQMRHFFQEGDLVVAEVQSLFQ
DGSVGLHTRSLRYGKLRNGALAVVPPVLVRRHKSHFLSLMQLPERGVDLVLGLNGWIWVS
KHVPFDMAKAEGEGADRDEAMETDGVYSDVNEVRIWC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccctggcggagacacctttccgcctcgtgcgtgcgcagaggggcggcgccgtgtcg
gcctatacgcatgcgtcggggtctgagacacgcaactttgatataatgggcgtcgcggac
gacgccatggacgaagagggcgagcaggacacggggctgctggccatgcccggccagggc
gtggcaacgagcctcaagtacatgcggggccacggctgctacctggatgcgtcgcaggcc
gagattgtctcgtcgctcagcggcacgatcgaaaaagtcaacaagcttgtgtcggtgcgc
cctgtccgcacgcgctaccgccccgaggtaggtgacctggtgattgggcgcatcacggac
gtgcagtcgcgccgctggaaagtcgacattggtgcgaagacggatgcgtcactgcagctc
tcgtcgatcaacctgccaggtggtgtgcagcgcaagaagctcgagtcggacgagctgcag
atgcgccactttttccaggagggcgacctggtggtggccgaggtccagtcgctcttccag
gacgggagcgtcggcctgcacacgcgctcgctgcggtacggaaagctgcgcaatggcgca
ctggcggtcgtcccgcccgtcctcgtgcggcgccacaagagccactttctctcgctcatg
cagctgcccgagcgcggcgtcgacttggtgctcggcctcaacggctggatctgggtgtcg
aagcatgtgccctttgacatggcgaaggccgagggcgagggcgccgacagggacgaggcg
atggagacagatggcgtgtacagcgacgtgaacgaggtacgtatctggtgctga
DBGET
integrated database retrieval system
