KEGG   Malassezia sympodialis: MSY001_3459
Entry
MSY001_3459       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
msym  Malassezia sympodialis
Brite
KEGG Orthology (KO) [BR:msym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msym03009]
    MSY001_3459
Ribosome biogenesis [BR:msym03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    MSY001_3459
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st WDR55 NBCH_WD40 Beta-prop_HPS5 DUF7165 Beta-prop_LRRK2 WDR54 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st eIF2A
Other DBs
NCBI-GeneID: 30058343
NCBI-ProteinID: XP_018741928
LinkDB
Position
Unknown
AA seq 480 aa
MATMRRVAALYPQEVLLTASSSSSQRGALYVLDPASSSQTPLLHLKGTTHAAPHGVSFVP
SATHAAHDAGTSGLVAAMESDKAVVSVYSWQRDQPVARLVLPQKMRCLALSPCGTYLAAG
GPDGRLCVWDVGTGALLSSLEVHYRAVTVLRWTPDSAALITASEDARVCVWSVPGIFHAT
DLAGASTGALPTPYATFSDHTLEVTDLAVAPGAFPAAARVWSASLDGTVKLWDLSARRLV
STFVVDEPVRHLALDPLERFLLVNAEQGVRRVELYEPQGGAARGGGGAAGHSTPVSDAPR
VSVPDSVTALALSHASSHAALGTRSGAIYLVDVLTLQTVRVLQAGASLAKAAAPTPVTYI
GTLVRPIDLMGHLPWQGAKRHARQDAGTSSSAYVQALPLRAVATQLARTIQPPLHAPHML
LRVGAGAASSAASVQRWLSAGQGTAPAVPAVRAGAEALADSAPLASTASPGDVAALRTER
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcgaccatgcgccgcgtcgcggccttgtatccgcaagaggtcctcctcactgcctcg
tcgtcgtcgtcgcagcgcggcgcgctctatgtattggacccagcgtcgtcgtcgcagacg
cccctcctgcacctgaagggcaccacccacgcagccccccacggcgtgtcgttcgtgccg
tccgccacacacgctgcgcacgatgccggcacgagtggtcttgtcgccgcaatggagtcg
gacaaggccgtcgttagcgtgtattcgtggcagcgcgaccagccggttgcccgcctcgtg
ctgccgcagaaaatgcggtgccttgccctgtcgccgtgcggcacctacctggcggccggc
ggccccgatggccgcctgtgcgtgtgggacgtgggcaccggcgccctcctgtcgtccctt
gaagtgcactaccgcgccgtgacggtgctgcgctggacgcccgactcggccgcgctcatc
accgccagcgaagacgcgcgtgtgtgtgtctggagtgtgccgggcatcttccacgcgacc
gacctggccggcgcgagcaccggtgcactgccgacgccgtatgccaccttctccgatcac
acgctcgaggtcacagacttggcggtagcgcccggcgcctttcctgccgccgcgcgcgtt
tggagcgcaagcctcgatggcaccgtcaagctgtgggatctgagcgcgcgccgccttgtc
agcacgtttgtcgtcgacgagcctgtgcggcacctcgcgctcgacccgctcgagcgcttc
ctccttgtgaacgcggagcagggcgttcgccgcgtggagctgtacgagccgcagggcggc
gcggcgcgcggcggcggcggcgctgcgggccacagcactcctgtgtcggatgcgccgcgc
gtgtcggtgcccgattcggtcacagctctcgcgctctcgcatgcctcgtcgcatgcagcg
ctcggcacgcgctccggcgccatctaccttgtggacgtgctgacgctgcagaccgtgcgt
gtgctccaggccggtgcgagtcttgcgaaggccgcggcgccgacgccagtgacgtacatt
ggcaccctcgtgcgtcccatcgacctgatgggccacctgccatggcaaggcgccaagcgc
catgcgcggcaggatgcgggcacctctagcagtgcgtacgtgcaggcgctgccgctgcgt
gctgtggcgacgcagctggcgcgtacgatccagccaccgctccatgcgccgcacatgctc
cttcgagtcggcgcgggcgctgcgtcgtcggcggcgagtgtgcagcgctggctgagcgcg
ggacagggcaccgcacccgccgtgccagccgtccgtgctggtgccgaggctctcgccgac
agtgcgccgctggccagcacggcgtcgcctggcgacgtagcggccctccgcactgaacga
tga

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