KEGG   Malassezia sympodialis: MSY001_3508
Entry
MSY001_3508       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_3508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_3508
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MSY001_3508
  mRNA degradation factors
   3'-5' decay
    Pan complex
     MSY001_3508
SSDB
Motif
Pfam: Pan3_PK
Other DBs
NCBI-GeneID: 30058392
NCBI-ProteinID: XP_018741969
UniProt: M5ESC1
LinkDB
Position
Unknown
AA seq 595 aa
MGTEARAAPGPVDGAPPARKDTGTSLSNVLSSSNASLATISFQPRSTPSLQARVAEAPVF
VPRSAGAGPSAGMRVHTPPADVPSRVPPASAPAGDAPFVPYYSYERDERAVRQPLQYHLC
APPLPHVSNMHPAHIATMAFFMDPTLHEELHRKQEALYATGAPPEPGTATPLPSALHVYH
SLVPLERGDAPPPHPLLDPRFAHGSQHALTGASGDPSRVFGYRTYAYKATCALDGKCYVL
RRLEGVPIAQPQALASVERWRKIRHPSLVAVREAFTTHAFGDHSLVFVYDYHPLATTLYM
EHMTVKPLQPDRRTGRLQPVSAHVPERVLWTYACQLAGLLRDVHAAGLAAQCLEPSKVLR
TAHHRVRLGGCAIFDVLQHHAQAPADAQAALVQRQRDDLRALGRLLLCTACNNVAAAHTE
DASLATVRGKYSAEWHLFLEQLLAPEALASADAVLHALAPHLAEALGASFHYSDLLEAAL
MRELENGRLVRLLCKLNAIHERPEWEGDAQWAETGERYVLRLFRDLVFHAVDEHGRPALD
LSHTLVHLNKLDAGADEKIMLTSRDERNCVVVSYADLKKQVEAVWAELRQGPRQP
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgggcaccgaggcgcgcgcagcgccggggccggtggacggcgccccccctgcccggaag
gataccgggacctcgctctcgaatgtgctctcaagttcgaatgcctcgctggcgacgatc
tcgttccagcctcgctctacgccatcgctgcaggcgcgggtcgccgaggcgcccgtcttt
gtgccgcgcagtgccggcgcgggcccgtcggcgggcatgcgcgtgcatacgccgccggcg
gacgtgccgagtcgtgtgccgcccgcgtcggcgccggcgggcgacgcgccgttcgtgccg
tactactcgtacgagcgcgacgagcgcgccgtgcggcagccgctgcagtaccacctgtgt
gcgccgccgctcccccacgtcagcaatatgcaccccgcgcacatcgcgacgatggcgttc
ttcatggacccgacgctgcacgaggagctgcaccgcaagcaggaggcgctgtatgcgacg
ggcgcgccgcctgagccaggcaccgcgacgccgctgccgagcgcgctgcacgtgtaccac
agcctcgtgccgctcgagcgcggcgacgcgccgccgccgcacccgctccttgacccgcgc
ttcgcgcatggctcgcagcacgcgcttaccggcgcgtcgggcgacccgagtcgcgtgttc
ggctaccgcacgtacgcgtacaaggcgacgtgtgcgctcgacggcaagtgctacgtgctg
cgccgcctcgagggcgtgccgatcgcgcagccgcaggcgctcgcgagcgtcgagcgctgg
cgcaagatccggcaccccagcctcgtggcggtgcgcgaggcgttcacgacgcacgcgttc
ggcgaccactcgctcgtgtttgtgtacgactaccaccccctcgctacgacgctctacatg
gagcacatgaccgtcaagccgctgcagccggaccgccgcaccgggcgcctgcagcccgtg
tcggcgcatgtgccggagcgcgtgctgtggacgtatgcgtgccagctcgcgggcctcctg
cgcgacgtgcacgccgcgggcctcgcggcgcagtgcctcgagccgagcaaggtgctgcgc
acggcgcaccaccgcgtgcgcctcggcggctgtgcgatcttcgatgtcctgcagcaccac
gcgcaggccccggccgatgcgcaggcggcgctcgtgcagcggcagcgcgacgatctgcgc
gcgctggggcgcctgctgctgtgcaccgcatgcaacaacgtcgcggccgcgcacaccgag
gacgcgagcctcgcgacggtgcgcggcaagtacagcgccgagtggcacctcttcctcgag
cagctgctcgcgcccgaggcgctcgcgagcgcggacgccgtgctgcacgcgctggcgccg
cacctcgcggaggcgcttggcgcgtcgttccactactcggacctcctggaggccgccctc
atgcgcgagctcgagaacgggcgcttggtgcgcctgctgtgcaagctgaacgccatccac
gagcgccccgagtgggagggcgacgcgcagtgggccgagacgggcgagcgctacgtgctc
cggctgttccgcgacctggtgttccacgcggtcgacgagcacggccgccccgcgctcgat
ctcagccacacgctcgtgcacctcaacaagctcgatgcgggcgccgacgagaagatcatg
cttacgagccgcgacgagcggaactgcgtcgtggtcagctacgcggacctcaagaagcag
gtggaggccgtgtgggccgagctccgacagggaccccgtcagccatag

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