Malassezia sympodialis: MSY001_3508
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Entry
MSY001_3508 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
msym
Malassezia sympodialis
Pathway
msym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSY001_3508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_3508
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MSY001_3508
mRNA degradation factors
3'-5' decay
Pan complex
MSY001_3508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Motif
Other DBs
NCBI-GeneID:
30058392
NCBI-ProteinID:
XP_018741969
UniProt:
M5ESC1
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MGTEARAAPGPVDGAPPARKDTGTSLSNVLSSSNASLATISFQPRSTPSLQARVAEAPVF
VPRSAGAGPSAGMRVHTPPADVPSRVPPASAPAGDAPFVPYYSYERDERAVRQPLQYHLC
APPLPHVSNMHPAHIATMAFFMDPTLHEELHRKQEALYATGAPPEPGTATPLPSALHVYH
SLVPLERGDAPPPHPLLDPRFAHGSQHALTGASGDPSRVFGYRTYAYKATCALDGKCYVL
RRLEGVPIAQPQALASVERWRKIRHPSLVAVREAFTTHAFGDHSLVFVYDYHPLATTLYM
EHMTVKPLQPDRRTGRLQPVSAHVPERVLWTYACQLAGLLRDVHAAGLAAQCLEPSKVLR
TAHHRVRLGGCAIFDVLQHHAQAPADAQAALVQRQRDDLRALGRLLLCTACNNVAAAHTE
DASLATVRGKYSAEWHLFLEQLLAPEALASADAVLHALAPHLAEALGASFHYSDLLEAAL
MRELENGRLVRLLCKLNAIHERPEWEGDAQWAETGERYVLRLFRDLVFHAVDEHGRPALD
LSHTLVHLNKLDAGADEKIMLTSRDERNCVVVSYADLKKQVEAVWAELRQGPRQP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgaggcgcgcgcagcgccggggccggtggacggcgccccccctgcccggaag
gataccgggacctcgctctcgaatgtgctctcaagttcgaatgcctcgctggcgacgatc
tcgttccagcctcgctctacgccatcgctgcaggcgcgggtcgccgaggcgcccgtcttt
gtgccgcgcagtgccggcgcgggcccgtcggcgggcatgcgcgtgcatacgccgccggcg
gacgtgccgagtcgtgtgccgcccgcgtcggcgccggcgggcgacgcgccgttcgtgccg
tactactcgtacgagcgcgacgagcgcgccgtgcggcagccgctgcagtaccacctgtgt
gcgccgccgctcccccacgtcagcaatatgcaccccgcgcacatcgcgacgatggcgttc
ttcatggacccgacgctgcacgaggagctgcaccgcaagcaggaggcgctgtatgcgacg
ggcgcgccgcctgagccaggcaccgcgacgccgctgccgagcgcgctgcacgtgtaccac
agcctcgtgccgctcgagcgcggcgacgcgccgccgccgcacccgctccttgacccgcgc
ttcgcgcatggctcgcagcacgcgcttaccggcgcgtcgggcgacccgagtcgcgtgttc
ggctaccgcacgtacgcgtacaaggcgacgtgtgcgctcgacggcaagtgctacgtgctg
cgccgcctcgagggcgtgccgatcgcgcagccgcaggcgctcgcgagcgtcgagcgctgg
cgcaagatccggcaccccagcctcgtggcggtgcgcgaggcgttcacgacgcacgcgttc
ggcgaccactcgctcgtgtttgtgtacgactaccaccccctcgctacgacgctctacatg
gagcacatgaccgtcaagccgctgcagccggaccgccgcaccgggcgcctgcagcccgtg
tcggcgcatgtgccggagcgcgtgctgtggacgtatgcgtgccagctcgcgggcctcctg
cgcgacgtgcacgccgcgggcctcgcggcgcagtgcctcgagccgagcaaggtgctgcgc
acggcgcaccaccgcgtgcgcctcggcggctgtgcgatcttcgatgtcctgcagcaccac
gcgcaggccccggccgatgcgcaggcggcgctcgtgcagcggcagcgcgacgatctgcgc
gcgctggggcgcctgctgctgtgcaccgcatgcaacaacgtcgcggccgcgcacaccgag
gacgcgagcctcgcgacggtgcgcggcaagtacagcgccgagtggcacctcttcctcgag
cagctgctcgcgcccgaggcgctcgcgagcgcggacgccgtgctgcacgcgctggcgccg
cacctcgcggaggcgcttggcgcgtcgttccactactcggacctcctggaggccgccctc
atgcgcgagctcgagaacgggcgcttggtgcgcctgctgtgcaagctgaacgccatccac
gagcgccccgagtgggagggcgacgcgcagtgggccgagacgggcgagcgctacgtgctc
cggctgttccgcgacctggtgttccacgcggtcgacgagcacggccgccccgcgctcgat
ctcagccacacgctcgtgcacctcaacaagctcgatgcgggcgccgacgagaagatcatg
cttacgagccgcgacgagcggaactgcgtcgtggtcagctacgcggacctcaagaagcag
gtggaggccgtgtgggccgagctccgacagggaccccgtcagccatag
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