Mesoplasma syrphidae: CXP39_01205
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Entry
CXP39_01205 CDS
T05255
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
msyr
Mesoplasma syrphidae
Brite
KEGG Orthology (KO) [BR:
msyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyr03019
]
CXP39_01205
Messenger RNA biogenesis [BR:
msyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CXP39_01205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUF83918
UniProt:
A0A2K9BZY5
LinkDB
All DBs
Position
280547..281530
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AA seq
327 aa
AA seq
DB search
MLKLKDISTELNSVELLARVERVIVSTGSNGSNYMIVHLADATGRVEARKWVVTDQDREL
IKPNSYIYFKEIIPNEFRGILQLKIGDYEIWDEEKVAQKGFQNSDFFVVAPVNIEKQYAN
LMELLEKVSNPTFKALTIGLIKKYEKEFLIYPAAMTIHHNVTGGLFWHSYTLVKNCLAIR
ENYLYAAIDWDLLICGAILHDIGKIFELVDQTATDYSLEGKLLGHISIGNAELYKMAEEL
NIAKDESGKINSDLTLLQHMILASHGKKEYGSPTEPNIIEAVILSTFDNLDARIFKINDE
LTKVEQGSWTGRILSEDGKMYLKHYKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacttaaagatatttcaaccgaattaaattcagttgaacttctagcaagggtt
gagcgagtaattgtttcaactggaagtaacggaagtaattatatgattgttcatttagct
gatgcaaccggaagagttgaagcgcgtaaatgagtagtaactgatcaagatcgtgaactt
attaaaccaaatagctatatttattttaaagaaatcattccaaatgagtttagaggaatt
ttacaattgaaaattggagattatgaaatttgagatgaagagaaagttgcacaaaaagga
tttcaaaattctgatttctttgtagtagcaccggtcaatattgaaaagcaatatgctaat
ttaatggaattattagaaaaagtttcaaatccaactttcaaagcattgacaattggatta
attaagaaatatgaaaaagaatttttaatttatccagcagcaatgacaattcaccataat
gtaactgggggattattttgacatagttatacattagttaaaaattgtttagcaattaga
gaaaattatttgtatgcagctattgattgagatttgttaatctgtggagcaattcttcat
gatattggaaaaatctttgaacttgtagatcaaacagctactgattatagtttagaaggt
aaactattaggtcatattagtattggaaatgcggaattatacaaaatggctgaagaatta
aacattgccaaagatgaatcagggaaaattaattctgatttaacattattacaacatatg
attttggcaagtcatgggaaaaaagagtatggttcaccaactgaacctaatattattgaa
gctgttattttatcaacatttgataatttggatgcaagaatttttaaaatcaacgatgag
ttaactaaagttgagcaaggatcttgaacaggaagaattttaagtgaagatgggaaaatg
tatttaaaacattataaaaaataa
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