Mesoplasma syrphidae: CXP39_01945
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Entry
CXP39_01945 CDS
T05255
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
msyr
Mesoplasma syrphidae
Pathway
msyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CXP39_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyr03400
]
CXP39_01945
Enzymes [BR:
msyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CXP39_01945
DNA repair and recombination proteins [BR:
msyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CXP39_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
OB_YrrC
HHH_RecD2
PhoH
PIF1
AAA_12
nSTAND3
UvrD-helicase
AAA_22
TsaE
AAA_28
NTPase_1
NPHP3_N
AAA_16
DEAD
AAA_7
Helicase_RecD
AAA
Mg_chelatase
T2SSE
AAA_5
AAA_18
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUF83553
UniProt:
A0A2K9BND6
LinkDB
All DBs
Position
463227..465431
Genome browser
AA seq
734 aa
AA seq
DB search
MDELKTLRGYIFKTLYSNADGWGIAIFSSEENRKLQIKIKGNIGLMRNKVLYEIKGKFES
HVKFGKTFAVESYKIGETNSLEQTIKYLSSPLFPGVGKRAAETICEYYKINVIRKIKENY
DELFQIPGLDSKQAYIIRQQMIAIQDSERLTEIFFENDLKIDILNQMKKHTDSDEEIESI
FKNHFYAFATRRRLRSFEDVDKIALHFGQEEFGRERIAYWAQKLATDILMQTGDTYTDKT
ALFTKIFKTLNIEDESTVIQGILYAKEHDLLILTEQRIYTYESYNDEQIIAKKLIEINET
QKLVSEERLELLIDEVEKSIARSSKDDSFKYDEEQRQALRMFAHNKLFILTGGPGTGKTT
VIRGMVKLFNMLYNEPSIAIAAPTGRAASRIRESSWELPATTLHRLLCANSNDDFDIDAN
NPLHHNLIIVDECSMIENRLFSQFIQSIGSAKKIVLVGDVNQLASVGFGNMFEDIIQVQK
FPVMILKSIHRQKGGNGIIDLAYTIQESNLDYLDFSNLTNVNCRFTEDADTGLEQVKTIF
SSEKIELEQSPLNLQIIAPVYAGKLGIENLNNVIQAEYNDNILDQSKVYDRGRFRYTLKD
KIMFLKNDSQLDLANGDIGIIETINFKGDKFENAFVDFSNSQAVLESSNFNDVSLSYACS
VHKTQGSEYKKVILTIENGKTAFFLNKKILYTAVTRAKDELFIVGSKSLFLKAAKRLPPQ
RKTTLKQVILRNSN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactaaaaacactacgcggatatatctttaaaactttatattcaaatgctgat
ggatgaggaatcgctatttttagcagcgaagaaaatcgcaaattacaaataaaaattaaa
ggtaatattgggttaatgcgcaataaagttctttatgagattaaaggaaagtttgaaagt
catgttaagtttggaaaaacttttgctgttgaatcatataaaattggggaaacaaactct
ttagaacaaaccattaaatatttatcatcaccattgtttcctggagttggaaaaagagca
gctgaaactatttgcgagtactacaaaattaatgttattcgtaaaattaaggaaaactat
gatgagttatttcaaattccaggtttggattcaaaacaagcatatattattcgtcaacaa
atgatcgcaattcaagacagtgagcgtttaactgaaatcttttttgaaaatgatttaaaa
attgatattttaaatcaaatgaaaaaacatactgattctgatgaagaaattgaatcaatt
ttcaagaatcatttttatgcttttgcaactcgtcgtcgtttgcgtagttttgaagatgtt
gataagattgcactgcattttggtcaagaagaatttggtcgtgagcgaattgcttattga
gcacaaaaattagcaactgatattttaatgcaaactggagatacttatactgataagaca
gctttatttacaaagatttttaaaactttaaatattgaagatgaatctactgtaattcaa
ggaatcttatatgctaaagaacacgatcttttaattttaacagaacaacgtatttatact
tatgagagctataatgatgaacaaattattgcaaagaaattgattgaaattaatgaaact
caaaaactagtttctgaagaacgtttagaattactaattgatgaagtcgaaaaaagtatt
gcacgtagttctaaagatgatagctttaaatacgatgaagaacaacgtcaagcattaaga
atgtttgctcataataaattatttattttaactggaggacctggaactgggaaaacaact
gtaattcgtggaatggtgaagctttttaatatgctttataatgagccaagtattgctatt
gcggcgccaactggtcgagcagcttcaagaattagagaaagttcatgagaactaccagca
acaaccctacaccgtttattatgtgcaaattccaatgatgactttgatattgatgctaat
aacccattacatcataatttgattattgttgatgaatgttcaatgattgaaaatcgttta
ttttcacaatttattcagtcaattggaagcgctaaaaaaattgttttagtcggggacgta
aaccaattagcatcagttggatttggaaatatgtttgaagatattattcaagtccaaaaa
tttccagtaatgatcttaaaaagcatccatcgtcaaaaaggcggtaatggaattattgat
ttggcatataccattcaagaaagcaatttagattaccttgatttttcaaatttaactaat
gttaattgccgctttactgaagatgctgatactggcttagaacaagttaaaactattttt
agttctgaaaaaatagaacttgaacaatcaccactaaatttacaaattattgcaccagtt
tatgctggtaaattgggaattgaaaatttaaataatgttattcaagctgaatataatgac
aatattttagatcaaagtaaagtatatgatcgtgggcgttttcgttatactttaaaagat
aaaattatgtttttaaaaaatgattcacaattagatcttgccaatggagacattggaatt
atcgaaacaattaattttaaaggcgataaatttgaaaatgcctttgtagacttttcaaac
agccaagcagttttagaatcaagtaattttaatgacgtatcattatcttatgcatgtagt
gttcataaaactcaaggtagtgaatataagaaagttattttaacgattgaaaatggtaaa
actgcgtttttccttaataagaaaattttatatacagctgttactcgagcaaaagacgaa
ttgtttattgttggaagcaaaagtttatttttaaaagcagcaaaacgcttaccgcctcaa
cgaaaaactactttaaaacaagtgattttgagaaattctaattaa
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