Methanosarcina siciliae HI350: MSSIH_0080
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Entry
MSSIH_0080 CDS
T03864
Name
(GenBank) Transcription factor S
KO
K03057
transcription factor S
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msz03021
]
MSSIH_0080
Transcription machinery [BR:
msz03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
MSSIH_0080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_3
Zn_ribbon_IS1595
Zn_ribbon_CLPX_N
EDR4-like_1st
CPxCG_zf
FdhE_central
Zn_ribbon_6
Ogr_Delta
TackOD1
FYVE
Ribosomal_S27e
Zn_ribbon_double
DUF2752
IBR
DUF7568
Zn_ribbon_Nudix
GpA_ATPase
NANM
GFA
Zn_ribbon_PADR1
Zn_ribbon_15
DUF7837
DUF7685
DUF5817
Zn_ribbon_Brz
Baculo_LEF5_C
DUF5830
Motif
Other DBs
NCBI-ProteinID:
AKB30770
UniProt:
A0A0E3P9L5
LinkDB
All DBs
Position
complement(105999..106313)
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AA seq
104 aa
AA seq
DB search
MQFCPKCKSMMFPKDGNYHCRKCGNIIPIESDAENFVSKAKIDDHEVVVLEGEQTSGLPT
TNVKCPECGNNTAAWWLRQLRSADESETRFFKCTKCGFTWREYD
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctgtcccaaatgtaaaagtatgatgtttcctaaagacggcaactaccattgc
aggaagtgtggaaacataataccgattgaaagtgatgcagagaattttgtctctaaagcc
aagattgatgatcatgaagtagtggtactcgaaggggagcagacgtcaggcctgccaaca
acgaatgtaaaatgcccggagtgcgggaacaacactgcagcctggtggctcagacaactg
agatccgctgacgagtccgaaacccgtttcttcaagtgtacaaagtgcgggtttacgtgg
agagaatacgactga
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