Methanosarcina siciliae HI350: MSSIH_1064
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Entry
MSSIH_1064 CDS
T03864
Name
(GenBank) RNase L inhibitor
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msz03009
]
MSSIH_1064
Ribosome biogenesis [BR:
msz03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
MSSIH_1064
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
Fer4_6
Rad17
AAA_22
Fer4_21
AAA_16
Fer4_7
RNA_helicase
Fer4_2
Fer4_9
NACHT
Fer4_10
AAA
Fer4_4
VapE-like_dom
RsgA_GTPase
KAP_NTPase
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
AKB31754
UniProt:
A0A0E3PC36
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All DBs
Position
1302345..1304111
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AA seq
588 aa
AA seq
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MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIIFEEDGKPVISEELCVGCGICINKCP
FDAIMIIGLPEALQEPTHRYGPNGFALFGLPVPRIGKVSGILGPNGIGKSTSVQILSGTL
IPNFGQGKGDWDTVLEHYAGTALHDYFKDVVDGKVKVSQKPQYVDLIPKAFKGKTSELLE
KTDEKGVLDELIDRLDLKGVIERKISELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
YQRINVARLIQEISKDRAVLVVEHDLAILDMLTDVVHIAYGEPAGFGVVTLPKSVRVGIN
QYLKGYLPEENIRIRPESIRFEVHPPREDAQFQSMISFNSFSKQYGDGFSLKATGGSLRE
GEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIDVKISYKPQYIKADTPVSVQDFLRGI
TKRFGTSYYEVEIAAPLQLERIYESLLTDLSGGELQRVAIAACLSQEADLYILDEPSAHL
DVEQRSMVTKVINRFAENNQKTAMVVDHDIYMIDMLSQRLLVFEGESSVYGEANGPFSME
NGMNRFLKNLGITFRRDEETRRPRVNNLGSRLDREQKENGNYYYSAKD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagctatacttaacaaagacaggtgccagcccagaagatgcagtaaggagtgc
gaaaaatattgtcctagagtcaggacaggagacgaaaccattatttttgaggaagatggc
aagccggtcatctccgaagaactatgtgttggttgcgggatatgcattaacaaatgtcct
ttcgatgccatcatgatcatagggcttcctgaagctctgcaagagcccacgcacaggtac
gggccaaacggttttgctcttttcgggcttccagtgccgaggatagggaaggtatccggt
attttgggcccgaacgggatagggaagagtacctctgtccagattctttccggaactctg
atccctaacttcgggcagggaaaaggagactgggatacggtattagaacactatgcgggg
actgcgcttcatgactatttcaaagatgtagtggacggaaaggtaaaggtttcccaaaaa
ccccagtacgttgaccttatccccaaagctttcaaaggcaagacctccgagctgcttgaa
aaaaccgatgaaaagggggttctggacgaactcatcgaccgtcttgacctgaaaggcgta
atcgagcgaaaaatttcggaattgagtggtggggaacttcagagagttgcaattgcagcc
tgtgcggcaagagatgcccagttttatttctttgacgaaataagcccttacctcgacata
taccagaggattaacgttgcccgtctgattcaggaaatctcaaaggacagggcagttctt
gtagtcgagcacgaccttgcgatcctggacatgcttacggacgtcgttcacatagcttac
ggtgaacccgcaggattcggtgtggtcactctcccgaaaagtgtgcgagtcggaatcaat
cagtaccttaaaggctacctccctgaagaaaatatccggatccggcccgaatccatcagg
ttcgaggtccatcccccgagagaggacgcccagttccagtctatgatctcctttaacagc
ttctcaaagcagtatggggacggcttctctctcaaggcaaccggcggaagcctgcgggaa
ggggaagtgctcgggatagtcgggcctaacgggataggaaaatcaacatttgtaaaagtc
ctggcaggggaaatcaagccagatgaaggggatccgggaattgatgttaaaatttcctac
aagccccagtatattaaagccgatactcctgtaagtgtccaggactttctgaggggaatt
acaaagcgtttcgggaccagctactatgaggttgagattgcagctcccctccagcttgaa
agaatctatgaaagcctgcttaccgatctgagtggtggagaactgcagagggtggcaatt
gccgcctgcctgtcccaggaagccgacctctatatcctggacgagccgagtgctcacctt
gatgtggagcagcgttctatggtcaccaaagtcatcaaccgctttgccgaaaacaaccag
aagacagctatggttgttgaccacgatatctatatgatcgatatgctcagccaacgcctc
cttgtttttgaaggcgagtcttctgtctacggtgaagccaacgggcctttcagcatggaa
aacggcatgaataggttcctgaaaaacctcggcatcactttccgcagggatgaagaaacg
aggcgtccccgtgtaaacaacctcggctcaaggcttgaccgggagcagaaggaaaacgga
aactactattattccgctaaagactga
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