Methanosarcina siciliae HI350: MSSIH_1184
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Entry
MSSIH_1184 CDS
T03864
Name
(GenBank) hypothetical protein
Organism
msz
Methanosarcina siciliae HI350
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_8
TPR_19
TPR_17
TPR_14
TPR_11
TPR_9
TPR_6
TPR_12
ANAPC3
TPR_CcmH_CycH
Fis1_TPR_C
TPR_7
PPTA
ARM_TT21_5th
NatA_aux_su
ARM_TT21_N
TPR_Slam
T7SS_EccA1_N
ARM_TT21_C
SRP_TPR_like
BTAD
TPR_10
TPR-S
TPR_20
Coatomer_E
HEAT_Nup120
PknG_TPR
TPR_15
ARM_TT21_2nd
Paf67
YfiO
DUF7017
DUF3856
Csm6_6H
ARM_TT21_4th
TPR_P4H
FAT
Iml2-TPR_39
ChAPs
DUF5588
PPR_3
SHNi-TPR
Motif
Other DBs
NCBI-ProteinID:
AKB31874
UniProt:
A0A0E3PC62
LinkDB
All DBs
Position
complement(1447733..1453393)
Genome browser
AA seq
1886 aa
AA seq
DB search
MSLQDYTTKKGIGGIIITNDEAFQRGLDLVKRKKYEKAINTFNKILDKDPGHKEALFYRG
LALLETEKTQEALDSFNKVLQLQPGNSDALYRKGTCLAALGRFEEALETYENVLESAPDA
PEIWYMMGLAFAEIDRAEASILCFEKALELKPAYTDAWCAMGTVAGKTERYEEALEDFER
ALEISPGNTEAWYAKGLILSRLEKYENALECFDFLIRESPKDTAALEQKCLLLANLGKKE
EALEALEDFLKKFPANEASLYHKGILLSELSRYEEAEKTFSKVLKLNPGHSEAWFRKGFA
LVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALETFDAMLETYPDMEE
IWYNRALALLKLQDLLEAARSFARVTELDPGNTDAWFQQGCLLARAGKYEEALETFDRLL
ESHPDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPENYNMWLQKGLLLLDSRKFETA
LEAFENATDLKPDDEICWMNRGFALYSLERYEEALEAFREGLRLNPYLEKGWNKKGIVLG
KLGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEKAFAEVLKTNPENLDSL
YNRGISLLRLGRNEEALEYLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFEKLAAK
NPEELEIQCRKGKLAMELGKHETALQAFEKILLKKPGSKEAWYRKGLALLNLERFEAAVK
AFDEVIVRNTTNDPSYEDAGTLKGFSQMKLGNFLPALETFESVLEKNPDSGITWYYKGLT
LQNLQRQEEAARAFESALRLNPELSDALEYRAICLFETGQYETALNAFEALLEKDPENLS
ALNSRAICFLELERHKEAVDALSKLLEINPDMEETKSRLDEAKFKLGIEYFKLGQYDEAL
ALFDGIKEETRAISGKASREANGEASEDSQKDSPLYWKGLVFIRQEAYEKALEVFSKLTG
KDPKFADGWYFIGLSCSKLGKHEEASKALKKVLEIDPAFRNLQDTYYLLGISCFELENFE
EALQTFEEALSTAPENSERNPDEAQGIMYKKSLSLLRLGRYAEAESGFKEVLALDPANSE
GLAHLSTACFKQGNYKEALEIFERVLSQNPARKTILFRKGLALKIFGKKHEALEAFDLVL
KLKPDCTYALDQRGYTLFELEKYEEAVEAFEAALEYSPKKADMQYLRALALFRIGNFKEA
LQEFEKAFDLGCRKSEIHYYTGLSCFENGDYEGAIKAFDIVLGAGLKEPEILQKRALALF
ELGKAEEAVSAVNSLLEFSAENLNGEISKDLPEGTGEENRDTGDTEEAPQVVEAQQTAGT
PQVNPELLEKFASAQIELGNYEEALLPLEKLIRESLASKKTFYSAGIALMGLGRQEEAFE
VFSEILEVYPDFKKAWYGKGLVLFSQERYEEALEAFEQAVMESPYEVAKIEESEIEESEI
EESEIGESKISDPELEDAWTKIGLVQLKTRRYEDAFETFERILEKNQTDANVWYLCGLVV
RGLDQNEEAVEVFEKALELNPALTAALEQKGLALLSLCRYEEARDAFGSALARNPENTDI
LYNRAVASYKLLDFEEASKDFEKLLLFAPDFPDYTRACYMLGIASIELQDYERALQALAL
VLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLN
EALKAFEKAALFNSKNEEALYNAATTLIKLNRVQESLGYFDRILEIAPENYDAMNYKGVA
FCMLEQYREALRAFDNVLKKDPKNIKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEP
SLRYLGLSLAKTGDYEDALKAFEKILRINPQDPQSMNYRGVLLGKLERYGEAIKAFDEIL
SIYPDMADAKEKLEVLKSLENEEESY
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcaggattataccacgaaaaaagggatcggaggaattattatcactaacgat
gaagcctttcagagaggccttgacctggttaaacgcaaaaagtacgaaaaagccataaac
acattcaataaaattctggataaagatccgggccataaggaagcccttttctacagggga
cttgcccttcttgaaaccgaaaaaacccaggaagccctcgattcctttaataaagtcctg
cagcttcaacctggaaactccgacgccctctacagaaagggaacctgtcttgccgctctc
gggagatttgaagaagccctggaaacatatgaaaatgtccttgaaagtgccccggatgcc
cctgaaatctggtatatgatggggcttgcttttgccgagatagatagagctgaagcttca
atcctctgttttgaaaaagccctggaactcaagcccgcgtatacagacgcctggtgtgca
atgggaacagtagcaggaaaaaccgaaagatacgaagaagccctggaagattttgagcgg
gcacttgaaataagccccggaaatacggaagcctggtatgcaaagggcctgattctttcc
aggcttgaaaaatacgaaaatgcactcgaatgttttgattttcttatccgggaaagcccg
aaagatactgcggcccttgaacagaaatgcctcctccttgcaaacctcgggaagaaagaa
gaggctctggaagccctcgaggactttttaaagaaatttcctgcaaatgaagcttccctc
taccataaaggcatccttttaagcgaactttcaagatatgaggaagctgaaaaaaccttt
tcaaaagtattgaagctaaaccccggacacagcgaagcctggttcaggaaagggttcgcc
cttgtacagctgctcaggcttaatgaagcgatagaagcttttgacgaagccatcaggctc
gaccctgcctattttgaagcctggaattacaagtgctttgccctgatgaaacttgaggtc
tatgaagaagccctggaaaccttcgatgccatgctcgaaacctatcccgacatggaggag
atctggtacaaccgggcacttgctcttctgaaacttcaggaccttctggaagctgcccgg
tcctttgcccgcgtcacggaacttgaccccggaaatacggacgcctggttccagcagggc
tgcctgcttgcccgagccgggaaatatgaagaagccctggaaacctttgaccggctgctt
gaatcccaccctgactttaccgaagcccagaaattcaggggcaccgtgcttacagggctc
ggccggtttgaagaggcccttgaatcccttacgaaaagcctggaaaaggaaccggaaaac
tataacatgtggctccagaaaggactcctgctcctggacagcaggaaattcgaaactgcc
ctggaagcttttgaaaatgccacggacctgaaacccgatgacgaaatctgctggatgaac
agaggttttgccctttattccctggagcgttatgaagaagccctggaagctttcagggaa
ggcctgcgcctgaacccttatctggagaaaggctggaacaagaaaggaatagtgctcgga
aagcttggaaaaaccgaagaagccctggaagctttcgaagaagcagtaaaactcaggccg
gatttcgaagacgcctggaaaaacatgggcctcctgctttttgcctccgaagaatacgaa
aaagccgaaaaagcctttgccgaagttctcaaaacaaaccccgaaaaccttgactccctt
tacaacaggggcatctccctgctcaggctgggaagaaatgaagaagccctcgaatacctt
gaaaaagtcgtatccctaagtcccgattatccggaccttgcctacagcctcggagttgcc
cttatggaactcggagaactggaaaaagccctggagacctttgaaaagcttgctgcaaaa
aatccggaggaactggagatccagtgcaggaaagggaagcttgcaatggagctcgggaag
catgaaactgccctgcaggcattcgaaaagatattgctcaaaaagcccggatcaaaagaa
gcctggtacaggaaagggcttgccctgctgaacctggaacgtttcgaggctgcagtaaaa
gctttcgatgaagtaatagtaaggaacactacaaatgatccctcttatgaagatgccgga
accctcaagggtttttcccagatgaagctcggaaacttcctccctgccctggaaaccttt
gaaagcgtacttgagaaaaacccggattccgggattacctggtattataagggcctgacc
ctgcagaacctgcagagacaggaagaagcagccagagcctttgagtcagcgcttcgcctg
aacccggaactttccgatgcccttgaatacagagccatctgcctctttgaaaccggacag
tacgaaactgctcttaacgcctttgaggctttgcttgagaaggacccggaaaacctttca
gcccttaacagcagggcgatttgtttccttgaactcgaaaggcataaggaagcagttgat
gccctctccaaactgcttgaaattaaccctgatatggaagaaacaaagtccaggctcgat
gaagcaaagttcaaactcggaatcgaatatttcaagcttggacagtatgatgaggctctt
gccctttttgacggaataaaggaggaaacaagagctataagtggaaaagcaagtagagaa
gctaatggagaagcaagtgaagattctcaaaaagactctcccctttactggaaagggctt
gtgtttatccggcaggaagcttatgaaaaggcccttgaagtcttttcaaagctcacaggg
aaagacccgaagtttgcggatggctggtactttatcgggctgtcctgttcaaaacttggg
aaacatgaagaagcttcaaaagccctcaagaaagtccttgaaatcgacccggcattccgg
aaccttcaagatacatattacctgctgggaatctcctgttttgaactcgaaaactttgaa
gaagcccttcaaacttttgaagaagctctttcaacagctcctgaaaattcggagaggaac
cccgacgaagcccagggcattatgtataaaaagagcctttccctgctaaggctagggaga
tatgcggaagctgaatccggttttaaggaagtgcttgcccttgacccggcaaatagtgag
ggccttgcccacctgagcactgcctgtttcaagcaggggaattacaaagaagccctcgaa
atctttgagagggtgctcagtcagaacccggcaagaaaaactatccttttcaggaaggga
ctcgctttaaaaatatttgggaaaaaacatgaggctctggaagcttttgatcttgtcctt
aaactgaaacctgactgtacatacgcccttgaccagagaggatacacacttttcgaactt
gaaaagtatgaagaggcagttgaagcctttgaagcagccctggaatactccccgaaaaag
gcagatatgcaatacctgagggctcttgcccttttcaggatcggaaacttcaaagaagcc
ctgcaggagtttgaaaaagcctttgacctcgggtgccggaagtctgagattcattattac
acgggactttcctgcttcgaaaacggagattatgaaggagccataaaagcctttgatatc
gtcctcggagcaggtttgaaggagccggaaatcctgcaaaagagagctcttgcccttttc
gaactgggaaaggcagaagaagccgtatccgcagtaaattcccttcttgaattctccgca
gaaaacctgaacggagaaatatcaaaggacttgcctgaagggaccggagaagaaaataga
gatactggagatacggaagaagctccccaggtagtagaagctcaacaaacagcaggaact
ccccaggttaaccctgaactccttgagaaattcgcgtccgctcagatagaactcgggaac
tatgaagaagccctgctcccacttgaaaagcttataagagaaagcttagcttcaaagaag
accttttacagcgcggggatagcacttatggggcttggaaggcaggaagaagcctttgag
gtcttttccgaaatccttgaggtttacccggactttaagaaagcatggtacgggaaaggc
cttgtgttattttcacaggagcgatatgaagaagcccttgaagccttcgaacaggcagtg
atggaaagtccgtacgaagtggcaaaaattgaagaatcggaaattgaagaatcggaaatt
gaagaatcggaaattggggagtcaaaaataagtgacccggaactggaagacgcctggacc
aaaatagggcttgtccagctcaaaacccggagatatgaggatgcttttgagacctttgaa
aggatccttgagaaaaatcagacggatgcaaatgtgtggtacctgtgcgggcttgttgtg
cgcgggcttgaccagaacgaagaagcagtggaagttttcgaaaaggctcttgaactcaac
cctgccctgaccgctgcccttgaacaaaaaggactggcccttctttccctttgcaggtat
gaagaagccagggatgccttcggctcagccctcgcccgaaaccctgaaaacactgatatc
ctgtacaaccgggcagtagccagttacaagctccttgacttcgaagaagcctcaaaagac
tttgaaaagctgctcctctttgccccggacttccctgactacaccagagcctgttacatg
ctcgggattgccagcatagaactccaggattatgaaagagccctgcaggcccttgccctt
gtccttgaacgcgagcccgcgcacagggacgctctctataatatggccctcgtgctcttc
aatctcgaggagtatgaagaagccgccaggacctttgaacagctgcttgaagcctctccc
gaagatcccgaaagcctgaattacctcgggctctgcctccttgaacttgaagacctgaac
gaagccctgaaagccttcgaaaaagccgccctttttaactccaaaaacgaagaagccctt
tacaatgcagccacgaccctcatcaagttaaacagggtccaggagtccctcgggtacttt
gaccgcatccttgaaattgcccccgaaaactacgacgccatgaactacaaaggggttgcc
ttctgtatgcttgaacagtacagggaagccctcagggcctttgacaatgtacttaaaaag
gacccgaaaaacatcaaagcggtctacaatgtaggagtggtctgtttcaaacagaaactc
tacgaaaccgcagccagagccttcaaagaagcccttacaatcaacccctggcatgaacct
tccctcagatatctcggcctctcccttgcaaagaccggggattacgaagatgccctgaaa
gccttcgaaaagatcctcaggataaacccgcaggacccccagtccatgaactacagagga
gtcctcctcggaaagctggaaagatacggagaagcaataaaagcttttgacgaaatcctg
agcatctacccggacatggcggacgcgaaggaaaaactcgaggtcttaaagtcccttgag
aatgaagaagagtcctattaa
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