Methanosarcina siciliae HI350: MSSIH_2132
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Entry
MSSIH_2132 CDS
T03864
Name
(GenBank) cell surface protein
KO
K20276
large repetitive protein
Organism
msz
Methanosarcina siciliae HI350
Pathway
msz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSSIH_2132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3344
PKD_4
PKD
PQQ_3
PQQ
PQQ_2
CARDB
DUF7076
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
AKB32822
UniProt:
A0A0E3PFX9
LinkDB
All DBs
Position
complement(2669446..2674902)
Genome browser
AA seq
1818 aa
AA seq
DB search
MYAFYPNGTVRWSYNTGPAIYSTPAIDSDGTIYGESNARNLYAVNPNGTLKWEYTTGESM
MGSPAIGSDGTIYVGSTAGNLFAFYPDGTLRWTFSAANAFYGSPAIGPDGTIYAGSTDQN
LYAVNPDGTIKWNYTTGASIYGTPSIAADGTIYVGYDDSKLYAVNPDGTIKWNYTTGTSI
YGAPAIAADGTIYIGGYDSNLYAINPDGTLKWTYDADDKFYTTPTVGSDGTVYIGDCSGK
IYAINSDGTLKWEYTTDASIYNQAAIGSDGTLYVGSYDKKLYAFRDVADFNAGPKMGDVP
LTVQFTDKSSGSPTSWSWDFGDGNDTNSTVQNPVHVYTEPGLYNVTLTTTYASGNSYSEE
KTDYINVTSGGSGATAPIPSFTTDASSGYVPFTVQFTDTTTGNVSSLSWDFGDGGNSTEQ
NPVYTYLTEGTYTVTLTATGPGGTDTATSTMEVAAPLNTGSYDGGSPLLTVQEGNVSGGL
WHDSWPGFSTYAEKTFTLPNHTEIKWAMLYLDVYCGNMEEKRSFSATIDIDADGDGVYEL
QENEAYSTSYSGTPVWLNDHVNRVTSDYFMWYDLTDNITGNEVNVKATGGGYDGRIKHVT
LIVAYDDGDEDEIHYWVNQGHDTANPGYTGSTVFGTSALSDPGSVNLSSIYCASVNGAYT
FNAASLSSGGPQGDYFGYDDWNVTELFNSGQDSTLTYAPTGSYYKIQLALLTASGAVSSN
APGADFTANVTSGGIPLTVSFTDESTGSPSSWLWDFGDGNNSTEQNPVHTYFTEGTYSVN
LTVTNGDGSDSELKTDYITVTQAGQVATNDLSISGLVNTVTASAVFARETNPVKVLNVQN
TGTATLTNISIAVYASDVSSGTVPVNTTTIESLAGDAKTTVTLIDPTIRDLEGGTVTYTA
VVDPDNLIAETDETNNNKSSAAKNVRYNGYKGKGIYWEGGSNITTMHTFDLQGNLLYSTQ
PDSAYQPVGWESRTETWTASDLPVPDGSTIEKAFLYVAYNWDQTPGGYPWLNINFNGNTL
DNGNISTGNGTLYRDWSNFGAYADYEYGLCVYDVTDKFSSAGNSLVMTPVGENKNALYPS
TLVVIYGNDNETRKQIFINEECDELAYSETSYGTTPEEATAYAPFTGMSINVSNVQNATL
HSFAGSAGPDEGNLLFNGNIVASNAWQGSSNSGSPLVFDATNYINATGNVAGIQSTTSGG
MDALQQIFVIEYQADTPNLPTADFSATPTSGDSPLTVQFTDESTGSPTSWAWDFDNDGTV
DSTDQNPSHEYTVEGTYTVTLTATNAYGNDTETKTGYILVTNLTNPNRFTNPGFETGDFT
GWTTGSTTSISTSKIHSGAYGTHLDMSGTQDTNFVQQSVDLTNVASFSFWGYGESTTRTY
YVYIDDVLVAQPAATPNVWTQYTIPTNYSGVHTVAVKWIGSYSFGADIDDFSMNCVYANF
TATPTLGIAPLTVQFTDKSSGSPISWSWDFGDGDDTNSTVQNPVHVYAEPGLYNVILTTT
YVSGNSYSEEKTDYINVTSGGSGGDVPVAAFTADPISGTVPLTVQFTDNSTGSPTSWFWD
FGDGATSNESSPIHTYSAAGNYTVNLTVENTAGTDFELKTDYIEVSEASGSTVTLYFDPE
SSSVSENESTEISIVASNFPTGLSGYNLTVAIDDPAVAEIVDIKYPTWALITENSSLPGT
SIYLKTVDGGDVVKEGAAGVVLAILTVSGKEKGSANLSIGVKRLEDDSGDSIESALLTGT
IEVTLLSPLPDQEYAPKDLDGDGLYEDLTGNGEFSFVDIVAYFHNMDWIEENMPVEYFDF
NGNGRIDFDDVVDMFAMI
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgcattctacccgaatggtaccgttaggtggtcctacaatacagggccagccatt
tacagcaccccggcaatagattcggacggaaccatttatggagaaagcaatgctagaaac
ctgtatgccgtaaatcccaacgggacactgaaatgggaatataccaccggggagagtatg
atgggatcacctgcaataggatctgacggaactatatacgtgggaagcacggctggtaac
ctgtttgcattctatccggacggtaccctgaggtggaccttctctgccgctaatgctttt
tatggttcacctgcaataggacctgacgggactatctatgcaggaagtactgatcaaaat
ctgtatgccgtaaatcccgacgggaccattaaatggaactacacgaccggcgcaagtatt
tatggtacaccgtcgatcgcagcagacggcaccatctacgttgggtacgatgacagtaaa
ctttatgccgtaaatcccgacgggaccattaaatggaactacacgaccggcacaagtatt
tatggtgcaccggcgatcgcagcggacggcacaatatatattggcggctatgacagtaac
ctgtatgcgataaaccccgatggaacgcttaagtggacctacgatgccgatgataaattc
tatactacacctaccgtcggatcggatggtaccgtctacattggtgattgtagcggtaaa
atatatgcaataaattccgacgggactctgaagtgggaatataccaccgatgcatcgatt
tataatcaggcagcgataggatcggacggaaccctctatgttggaagctatgataagaaa
ctatatgcattcagggatgtcgcagatttcaatgcaggcccgaaaatgggcgatgtcccc
ctgacagtacagttcaccgataagtcttccggttccccgacctcgtggtcgtgggacttc
ggcgacggaaacgacaccaactcgacggttcagaaccctgtccatgtctacacggaaccc
gggctctacaacgtgacccttacgaccacttatgcatccggcaacagctattcggaagag
aagaccgactacatcaacgtcacgagcggaggttcgggagcaactgcacccatcccaagc
tttacgaccgatgcttcatccggctatgtacccttcaccgttcagttcaccgatacaacg
accggcaacgtgagcagtctctcatgggacttcggcgacggagggaactcaaccgagcag
aaccctgtctacacgtatctcaccgaaggaacctataccgttaccctgacggctacagga
ccgggcgggaccgatactgcgacttccacgatggaggtggccgcaccgctcaacacaggc
agctatgatggaggatcgccgctgctcaccgtgcaggaaggcaatgtctccggtggtttg
tggcacgattcatggccgggattcagcacttatgccgagaagacattcacactgccaaac
cacacggagatcaaatgggcgatgctctatttggacgtctattgcggcaatatggaggaa
aagagatcattttcggcgacaatcgacatagacgctgacggcgatggcgtctatgaacta
caggaaaatgaggcctacagcaccagttactctggcactcctgtatggctgaacgaccac
gtgaacagggtaacgagcgactacttcatgtggtatgatctcaccgacaatatcactgga
aatgaagtaaatgtcaaggctacaggaggaggctatgacggcaggatcaagcacgtaacc
ctcatcgttgcatacgatgacggggatgaggacgagatccattactgggtgaaccagggg
cacgatactgccaaccccggctatacgggttcaaccgtattcggcacgtccgccctatcc
gatcccggttcagtgaacctctcttccatatactgtgcgagcgtcaacggcgcatacacg
ttcaacgcagcgtctctctcatccgggggaccgcagggcgactacttcggatacgacgac
tggaatgtaaccgagcttttcaattcgggacaggatagcacacttacgtacgctcctacc
ggttcttattacaagatccagcttgcactcctgactgcgtccggtgcagtttcctccaat
gcccctggagcagacttcaccgcgaacgttacctccggtggtatcccccttacggtttcg
ttcaccgatgagtcgaccggttcaccttcttcctggctctgggacttcggggacggcaac
aactctacggaacaaaacccggtacatacatatttcactgagggaacctattctgttaac
ctcacagttacgaatggagatggaagcgattccgagctgaaaacggattatataaccgta
actcaagcgggtcaagtggcaactaacgaccttagcatctcaggactcgtcaacaccgtt
acggcttctgcggtctttgccagggaaacaaatcctgttaaagttctcaatgtccaaaac
acaggaactgctacccttaccaacatttcaattgctgtgtatgcaagcgatgtttccagt
ggaacagttcccgtaaacacgacaacgattgagtcccttgctggcgatgcaaaaactaca
gtaaccctgatcgaccccaccatccgtgaccttgaaggcggcaccgtgacctacactgcc
gttgttgacccggacaaccttatcgctgaaacggacgagacaaacaacaacaagagcagt
gcggccaaaaatgtcagatataacgggtataagggcaaaggcatctactgggaaggtgga
agcaatatcactaccatgcatacctttgatctccaggggaaccttttgtattccacgcag
cctgattcggcttaccaacctgttggctgggagagcaggaccgaaacctggactgcaagt
gaccttccggttccggacggctctaccatagaaaaggccttcctttatgttgcctacaac
tgggaccagacacccggcggatatccgtggttgaatattaacttcaacggaaacaccctt
gataacggaaacatctcaacaggaaacggaactctctacagggactggagcaattttgga
gcatatgctgattatgaatacgggctctgtgtctacgatgtaaccgacaagtttagttct
gcaggaaacagccttgtcatgacgcctgttggtgaaaacaaaaacgcactgtaccccagc
acccttgttgtgatctacggaaacgataatgaaacccgaaagcagatctttatcaacgag
gagtgcgacgagcttgcttactccgaaaccagttacggaaccactcctgaagaagctact
gcgtatgctcctttcacaggtatgtcaattaacgttagcaatgtccagaacgctacactg
cacagtttcgcgggaagtgcgggacctgatgaaggaaacctgcttttcaacgggaacata
gtggcaagcaatgcatggcagggaagttcaaattcaggaagccctctggtctttgatgct
acaaactacatcaacgcaaccggaaatgttgcaggtatacagagcacgacaagcggaggt
atggacgcactccagcagatatttgtgattgagtatcaggcagatacaccgaatctaccc
actgcagacttcagtgcgacaccaacatccggcgattccccgttaacagttcagttcacc
gatgagtctaccggctcccctacctcgtgggcatgggacttcgataacgacgggactgtc
gacagcaccgaccagaacccctcgcacgagtacacggttgaagggacatacaccgtaacc
ctcaccgcgacgaacgcatatggcaatgacaccgagacgaagaccggctatatcttggtt
accaatcttaccaatccaaaccggtttaccaatcccggatttgagaccggtgattttacc
ggatggacaacggggagcactaccagtatcagcacctcgaagatccatagcggggcgtat
ggtacccatctcgatatgtccggcactcaggacacgaatttcgtccagcagagtgttgac
ctgacgaatgtggcgagtttttccttctgggggtacggggaatcaaccaccaggacatat
tatgtgtatattgacgatgtccttgtggcgcagcctgctgctactccaaacgtatggacc
cagtatactatcccgacgaattactcgggagtccacacggtagcagtaaaatggatcgga
agttatagtttcggtgccgatatcgatgacttttcaatgaactgtgtttacgcaaatttc
accgcgacgccgacattgggaattgcacccctgaccgtgcagttcaccgataagtcttcc
ggttccccaatctcgtggtcgtgggacttcggcgacggagacgacaccaactcgacggtt
cagaaccctgtccatgtctacgcggaacccgggctctacaacgtgatccttacgaccact
tatgtatccggcaacagctattcggaagagaagaccgactacatcaacgtcacgagcggc
gggtccggcggagacgtcccggtcgcagccttcaccgcagatccgatctccgggacggtt
cctctgaccgtccaattcaccgataactcgaccggctctccaacctcctggttctgggac
ttcggcgacggtgcgacctctaatgaatcgagccccatacatacttattctgcagcaggt
aactacaccgtaaatctgactgtggaaaataccgctgggactgactttgaattaaaaaca
gattacatcgaagtttccgaagcttccggatcaaccgttactctctatttcgatcctgaa
agttcctcagtttcagaaaacgaatctactgaaataagtatcgttgccagtaatttccct
acaggtctttcaggctacaacctgaccgttgctattgacgacccggctgttgccgagata
gttgatataaagtacccgacctgggcactgattactgagaactcttccctaccagggact
tctatctatctgaagaccgttgacgggggagacgttgttaaggaaggggcagcaggtgtt
gtgcttgccattctcaccgtttctggaaaggaaaaaggatctgcgaatctttccataggg
gttaaacgtctggaggacgattccggagactctatcgagtcagctctcctgacagggaca
attgaagtaacccttctgtctcccctgccagatcaggaatatgcccctaaggaccttgat
ggagacggactctatgaagacctcaccggaaacggggagttcagtttcgtggatatagtg
gcatacttccataacatggactggatagaggaaaacatgccagtggagtacttcgacttc
aacgggaatgggaggatagactttgatgatgttgtggatatgtttgcaatgatctga
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