Methanosarcina siciliae HI350: MSSIH_2348
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Entry
MSSIH_2348 CDS
T03864
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msz03000
]
MSSIH_2348
Transcription factors [BR:
msz03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSSIH_2348
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
DUF7436
Motif
Other DBs
NCBI-ProteinID:
AKB33038
UniProt:
A0A0E3PFD2
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Position
3008955..3009941
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AA seq
328 aa
AA seq
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MSHIVLLFERMYSVSIAFNLTTSLSYGRTVVLIPLGKIIVLLYDKPKSSEIMDEKLLAKI
GLNRYESSVYLTLLKQDSMEASKLSHSSKVPIGKIYEVLKALKNYELVEIQPSRPQRYRA
VDPKYAFKLMYKRKEEETLNELKMLKEIFDEIERELCNDNLPQNVETVFWPDRFRNNELN
EMVDSFFEKIEHEICVVIHIKYRPGRSELYDASISTFSKAYLSLVQRGIKVKILDPGSQL
LPSLKELIDSIEDLSFKRYIKDLMEVRILETEYNFTITDSKITVLDIEDQFNMSRNLGMT
RIYDESYAKRFKAKFDELWTKGELFSLT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacatatcgttctgttgtttgaacggatgtattcggtcagtatagcctttaactta
acaacttcactttcatatggcagaacagtagtcttaataccgttaggaaagataatcgtt
ttactctacgataaaccgaaaagtagtgaaataatggatgaaaaattacttgcaaaaatt
ggattgaacagatatgagagttcagtttacctgaccctcctgaagcaggattctatggaa
gcaagcaaattatcccattcatcgaaagtccctataggaaagatctatgaggttctcaaa
gccctcaaaaattatgagcttgtcgaaatccagccgtcacgaccccagagataccgggcg
gtcgatcctaaatacgcatttaaactcatgtacaaaagaaaagaggaagaaaccctcaat
gagctcaaaatgctcaaagaaatattcgatgaaatcgaaagggaactctgcaacgacaat
ttaccacaaaatgttgaaactgtcttctggcctgacaggtttcgtaataatgaactaaat
gaaatggtggattcattttttgagaaaatcgagcatgaaatatgtgttgtaatccatatt
aagtacaggcctggaagatcagagctatatgatgcctcaatatccacttttagcaaagct
tatttgagtttagtacagcgtggcataaaagttaaaattttagatccgggatcacaatta
ctgccatcattaaaagagcttattgattcaatagaagatctgtcattcaaacgctatatt
aaggacctgatggaagtaagaattttagaaaccgaatacaattttacaatcactgattct
aagataaccgtgctcgatattgaagaccagttcaatatgagtagaaacctcggtatgaca
agaatatatgacgaatcatatgcaaagcgattcaaggcaaaatttgatgaactctggaca
aagggtgaattgttttctctgacttga
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