Methanosarcina siciliae HI350: MSSIH_2647
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Entry
MSSIH_2647 CDS
T03864
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msz03016
]
MSSIH_2647
Enzymes [BR:
msz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MSSIH_2647
Transfer RNA biogenesis [BR:
msz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MSSIH_2647
Prokaryotic type
MSSIH_2647
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
EFP_N
Neprosin
Motif
Other DBs
NCBI-ProteinID:
AKB33337
UniProt:
A0A0E3PF86
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All DBs
Position
3388054..3388971
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AA seq
305 aa
AA seq
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MLRITFLGTGGSLPTRNRNPSAVMVNREGELLLFDCGEGTQQQMMRAKTGMMSLSSIFVS
HFHADHFLGIPGLIQTMSFMGRKEPLMIYGPAGTREFTELFKALGYFNLKYEIRGTELKS
GDVVEGDGYVVRALKTEHSTPSLGYALIENPRPGRFNREKAVALGVPPGPLFSKLQKGNP
VEVGGKVVRPEQVMGTPRLGRTIVYSGDTRPCEAILEASRDTDVLIHDGSFADEMADWAE
ESMHSTAGEAAALAKEAGVRKLVLTHISSRYTDDVEPILNDSKKVFENVIVAEDLMELEI
PYRPE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcataacttttcttggcactggaggttctcttccaacccgcaaccgaaatccg
tcagcagtaatggtcaatagagaaggggagcttctactctttgactgtggcgaaggcacc
cagcagcagatgatgcgggcaaaaacagggatgatgagcctgtcctcgatttttgtcagt
cattttcatgccgatcattttctgggaattccgggcctgatccagaccatgtctttcatg
ggcagaaaagagcctcttatgatttacgggccagcggggacccgggaatttaccgaactc
ttcaaggctcttggctatttcaaccttaaatacgaaattcggggcacggaactgaaatcc
ggagacgttgtcgaaggggacggatatgtggtccgggctttaaagaccgaacacagcacg
ccgagtcttggctatgcccttattgaaaaccccaggcccggacgttttaacagggaaaag
gcagtcgctctcggagtcccacccggccctcttttctcaaaactgcaaaagggaaatcct
gtggaagtgggcggaaaggtggtaagacccgaacaagtcatgggaacccctaggctcggc
aggacaatcgtgtacagcggagacaccaggccctgtgaagccatacttgaggcaagcaga
gacaccgacgtcctgatccatgatggcagcttcgccgatgagatggcagactgggctgaa
gaatccatgcattcaactgcaggcgaggctgcagcccttgcaaaagaagccggagtcagg
aaactggtcctaacccatataagttcacgttataccgatgatgtggagcctatcctgaat
gattcaaaaaaagtgtttgaaaatgttattgtagccgaagacctgatggaacttgagatc
ccgtacaggcctgagtag
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