Methanosarcina siciliae HI350: MSSIH_2817
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Entry
MSSIH_2817 CDS
T03864
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msz03016
]
MSSIH_2817
Enzymes [BR:
msz01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MSSIH_2817
Transfer RNA biogenesis [BR:
msz03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MSSIH_2817
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AKB33507
UniProt:
A0A0E3PGE5
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All DBs
Position
3588508..3589560
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AA seq
350 aa
AA seq
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MKTQLEGDRILAGKEAVAELYKTGYFGRPREDGLELSLVEAAYLQFRGKIEIELEGKKLD
FRAFFEQASLRQPNFELKYIVYKDLKERGYYVQPSAADFRVYPRGSHPGKSAAKIFVHVL
SERQPLPVKLLQDSVISAENVHKQFILAVVDEESDLTFYEIKTAAPQGEMSEPYPSVKTD
ATFLEDRVIAWDAETSGALYARGFYGKMLDPERLQLSLVESLFLFSREVIVVRDRKGKVF
SFDEFVEKASEIESSFLRKYCAYKALRDSGHVVKTGFKFGTHFRVYRKVESIEKIPHSEY
LVNVIPSDYEFRLPVLSGAVRLANSVRKRMLFAVEKGEEVEYLDIGRVKM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacacaacttgaaggagaccggatccttgccggaaaggaagcggttgccgaactt
tacaaaacaggttatttcgggcggcccagggaggacgggcttgagctctcccttgtggaa
gccgcatacctccagttcagaggaaaaatcgagatagagcttgaaggaaaaaagcttgat
ttcagggcctttttcgagcaggcttctctgaggcagccgaacttcgaactgaaatatatc
gtttataaggatctcaaagagcgaggatattatgtccagccttcggctgcggacttcagg
gtctaccccagaggcagccatcccgggaaaagtgcggcaaaaatctttgtccacgtcctg
tcggaaaggcagccccttcccgtaaagctcttgcaggactcggtcatctcggcagaaaac
gtgcacaagcagtttatcctggccgtcgtggatgaagaaagcgacctgaccttctacgag
attaaaaccgctgctcctcagggagagatgtctgaaccctacccctcagtcaaaaccgat
gcgactttcctcgaagacagggtaatcgcctgggatgctgagacttccggggctctttat
gccaggggtttctacgggaaaatgctcgatcctgaaaggttgcagctctcccttgttgag
tccctcttcctcttttcgcgagaggttatagtcgtcagggacaggaaaggcaaggtcttc
tcctttgatgaatttgttgagaaagcctcggaaatcgaaagttctttcctgcggaaatac
tgtgcatataaagctctgcgagactcggggcacgtggtcaagaccggctttaagttcggg
acccatttcagggtctacaggaaagtcgagtccatagaaaaaattccccactccgagtat
ctcgtaaacgtaattccctctgattacgaattcaggcttccggttttgtccggggctgtc
aggcttgcaaacagcgtgcgcaaaagaatgctctttgcagttgagaaaggggaagaagtc
gagtacctggacatcggcagggtcaagatgtga
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