Methanosarcina siciliae HI350: MSSIH_2835
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Entry
MSSIH_2835 CDS
T03864
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msz03400
]
MSSIH_2835
DNA repair and recombination proteins [BR:
msz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSSIH_2835
Archaeal homologous recombinant proteins
MSSIH_2835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
LegC3_N
Motif
Other DBs
NCBI-ProteinID:
AKB33525
UniProt:
A0A0E3PGG1
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Position
3611001..3612770
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AA seq
589 aa
AA seq
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MDREIRILHTADTHLGYRQYHSEVRRQDFFKAFELVIQDAVDMQVDAVVHAGDLFDSRNP
TLEDLLETMNILSRLKAANIPFFGIVGNHESKQTTQWLDLFEEMGLAGRLGKTPKLVGDT
AIYGIDSVPKSKIPLYDYSGFEVPESLPENCRKLLVMHQIVQPFPYADWDCAEVLENLPF
KVDAILLGDYHKYEKIKVGEGETWATYSGSTERNSASENEPRSYNIITLSGEGPEISRRT
IPTRNFLFITAKIDGGEKPYEQIFSAINEHLEEIPESVVFLDISGDSDSVLSFSEIEEYL
LSKGALVSKVKDARIKENLPEEVVKVAFSDPDHAVAEEIRRMSLNDGGLIVDEIIRSPDV
SRSRVDEETENRLSRLIEAIDFKDPDFRIEIPASPVSPTDSIDPVSPINTVSSADPVSAV
SPESSTDHVSSVIIENHEKSIPAVEAEKVETLDPAGETEFAAGIAGKTETLRAPVRIKNS
ESLNEALKKSYEAPDKVREAPDVNPELPEPLPAFENTGSPETFGSCEKIVSSEIPEKGGV
EADSEKEDMDRVEKPAHDPDKAAKPVKQSQRKGKGKSAVPRQYNLGDYL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggaaataaggatactccacactgcagacacgcacctgggataccggcagtac
cacagcgaggtacggaggcaggacttttttaaggcttttgagttggtcattcaggatgcg
gttgacatgcaggttgatgctgttgtgcatgcgggagacctttttgactcgaggaatccg
acccttgaagacctccttgagactatgaacattctctcccggttgaaggctgcaaacata
ccttttttcggaattgtcgggaaccacgagagcaagcaaactacccagtggctggacctc
tttgaagagatggggcttgcgggaaggctcgggaaaacaccgaagcttgtcggggatacg
gcaatctacgggattgacagcgtccccaagtcaaaaattcctctttacgattattcagga
tttgaagtaccggagtccctgccggaaaactgcaggaagctccttgtgatgcaccagatc
gtacagcccttcccgtatgctgactgggactgcgccgaggtgcttgaaaacctgcccttt
aaggttgatgcaattctccttggggactaccacaaatatgagaaaataaaggtaggggaa
ggggagacctgggctacgtactcgggaagcaccgaacgcaacagtgcgtctgaaaacgag
ccccgttcttacaatattatcactctttccggggaagggccggagatcagcaggaggacc
atccctacccgtaatttcctttttatcacggcaaaaatcgatgggggagaaaagccttac
gaacagatcttttctgcaataaatgaacatcttgaagagattcccgaatctgtcgtgttt
ctggacatctcaggagattcagactcagttctttctttcagcgagatcgaagaatacctg
ttaagcaaaggagctcttgtgtcaaaggtgaaagatgccaggataaaagagaaccttccc
gaagaggttgtgaaagtcgcattttccgacccggaccatgcagttgccgaagagatacgc
aggatgagcttaaacgacggagggctgatagtcgatgagatcatccggagcccggacgtt
tcaaggtcaagggtggacgaagaaaccgagaaccggctttcgagattgattgaagcgata
gatttcaaagacccggatttcaggatagagatccctgccagccctgtaagtcctacagac
tctattgatcctgtcagtcctataaacaccgtaagttctgctgacccggtcagcgctgtt
agtcctgaaagctctactgaccatgtaagctctgtcataattgaaaatcatgaaaaatct
attccggcagttgaggctgaaaaggttgaaactcttgaccctgccggagaaactgaattt
gcggcgggaattgccggcaaaaccgaaaccttgcgggctcctgtcagaattaaaaactct
gaatctcttaacgaagcactcaagaagagttatgaagctcctgataaggtccgtgaagcc
cctgatgtgaaccctgaacttcctgagccccttccggcatttgaaaataccggctcccct
gaaacctttgggtcgtgtgagaagattgtttcatcagaaatccctgaaaagggtggggta
gaggcagattctgaaaaagaggacatggatagagttgaaaaacctgctcatgatccggat
aaagctgcaaaaccggtaaaacagagccagagaaaaggaaaaggaaagtctgccgtaccc
agacagtataaccttggtgattacctgtga
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