Methanosarcina siciliae HI350: MSSIH_2989
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Entry
MSSIH_2989 CDS
T03864
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
msz
Methanosarcina siciliae HI350
Pathway
msz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSSIH_2989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msz03019
]
MSSIH_2989
03012 Translation factors [BR:
msz03012
]
MSSIH_2989
Messenger RNA biogenesis [BR:
msz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSSIH_2989
Translation factors [BR:
msz03012
]
Eukaryotic type
Release factors
MSSIH_2989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
PWP3A-B_C
Zn_ribbon_LysW
HEAT_DAAF5
SLX1_C
DNA_ligase_ZBD
HypA
DNA_topoisoIV
Motif
Other DBs
NCBI-ProteinID:
AKB33679
UniProt:
A0A0E3PH15
LinkDB
All DBs
Position
complement(3789832..3791079)
Genome browser
AA seq
415 aa
AA seq
DB search
MAEYCTYEKYVLKKKLETLKNKSVKSAELISLYVPSDKQISDVIKHLKEEHEQASNIISK
LASNNVREALDSLLAKLRSLNKIPENGIVYFAGVVDTGANRTGMVNEVLIPPEPVVHYIY
HCDSVFYLEPIEEMLRECGTYGLILLDLREASVGMLVGKQIEAIKHLHSTVPGKQRKGGQ
SAHRFEQLRRIAIHDFYKRIGDAASEAFLELEPSDLKGILIGGHSPTKEEFYEGEFLHYE
LQKKVLGLFDTGYTDESGFSELINEAEDTLQGIDLIKQKKDMDIFFKEIATESGKVSYGE
DNVRANLEIKAVDVLLLSEELRAERVSLMCRVCGYENRRTRIWKTGEAVPTIGNCPECGS
ALEVTDLIDIVGEFSELADKGNARIAFISTDFDEGSQFMIAFGGIAAILRYSTGM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtactgtacatatgaaaaatatgtattaaaaaagaagcttgaaactctaaag
aataaaagtgtgaagagcgcggaattgatttccctttatgttccttctgataaacagatt
tcagatgttataaagcatttgaaagaagaacatgagcaggcttcgaacataatatccaaa
cttgccagcaataatgtacgggaagcccttgattctttgctggcaaagttaagatctctt
aacaaaattccggaaaacggaatcgtttattttgcaggagttgtcgataccggagctaac
aggacaggcatggtaaatgaagttcttattcctccggaacctgttgtacattatatatat
cactgtgattctgttttttatcttgagcctattgaggaaatgctcagggagtgcggtact
tatgggctcatacttcttgatttaagagaagctagtgtcggaatgcttgtaggtaagcaa
attgaagctattaagcatcttcattctacggttcctggcaaacaaagaaaaggagggcag
agtgcacatcgctttgaacagctcagacgcattgctattcatgatttctacaagagaata
ggggatgctgcaagtgaggcattccttgaattagagccttctgaccttaaaggcattctt
ataggagggcattccccgactaaagaagaattttatgaaggcgaatttctacattatgag
cttcagaaaaaggttcttggcctgtttgatacggggtatacggatgaatcgggtttttct
gagttaataaatgaagcagaggatactctccagggtattgacttaattaagcaaaagaaa
gatatggacatattttttaaagaaatcgctaccgaatccggtaaagtatcttatggagag
gacaatgtaagggcaaatcttgagataaaggcggttgacgtgcttttactttctgaagag
ttgcgggctgaaagagtatctctcatgtgcagggtttgcggatatgagaatagacggaca
agaatatggaaaacaggtgaagctgttcctacgattggaaattgtcctgaatgcggttct
gcacttgaagttacggatcttattgatatcgtgggggaattttcagaactcgcagataaa
ggcaatgcaaggattgcttttatatcaacagatttcgacgaagggtctcaatttatgata
gcttttggcggaattgctgcaatccttagatatagtacagggatgtag
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