KEGG   Methanosarcina siciliae HI350: MSSIH_3274
Entry
MSSIH_3274        CDS       T03864                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
msz  Methanosarcina siciliae HI350
Pathway
msz03030  DNA replication
msz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSSIH_3274
   03410 Base excision repair
    MSSIH_3274
   03450 Non-homologous end-joining
    MSSIH_3274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msz03032]
    MSSIH_3274
   03400 DNA repair and recombination proteins [BR:msz03400]
    MSSIH_3274
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msz04147]
    MSSIH_3274
DNA replication proteins [BR:msz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSSIH_3274
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MSSIH_3274
DNA repair and recombination proteins [BR:msz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSSIH_3274
Exosome [BR:msz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSSIH_3274
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: AKB33964
UniProt: A0A0E3PGS4
LinkDB
Position
4138845..4139861
AA seq 338 aa
MGTDIGDLLQKRKIELSDLSNRVVAVDAFNTLHQFLSIIRQRDGSPLVNSRGKVTSHLSG
LLYRTASLIEAGIKPVFIFDGKPPDLKSETLSRRKEVRETSREKWANAKAEGDLEAAYKY
AQASSKVDQEIVEDSKYLLGIMGIPWIQAPCEGEAQAAHMVLKKDADYVASQDYDSFLFG
APKVVRNMAVTGKRKLPGKNVYVDVKLEVIDLEETLRALGVNRNQLIDIAICVGTDYNKG
LEKVGPKTALKLIKKHGDIHAVLREKEVEIEGLDRIRELFIHPEVTDNYEIKWTKPDSEK
LIKFLSEKNDFSAERVEKAAERLKAVSGARQKTLDQWF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggcacggatataggagatctgcttcagaaaaggaaaatagagctttctgacctttca
aaccgagtggttgcagttgatgcatttaacacccttcaccagtttttgagcattatccgc
cagagggacggaagtcctctggttaattcaagagggaaagtgacctctcacctttccggg
ctgctctacaggacagcaagcctgattgaagccggcatcaaacctgttttcatttttgac
ggcaagccccctgacctgaaatccgaaaccctgagccggaggaaagaagtaagggagact
tctcgggaaaaatgggcaaatgcaaaggcagaaggggaccttgaagctgcttataagtat
gctcaggcatcttcaaaggtcgaccaggaaatcgttgaagattcaaaatacctcctcgga
ataatgggcattccctggatacaggctccctgtgaaggagaggcacaggctgcccacatg
gttctgaagaaagacgcagactatgttgcttcacaggactatgattcctttcttttcgga
gcccccaaagttgtccgcaatatggctgtcaccggaaagcgtaagctccccggaaagaat
gtctatgttgatgtcaaacttgaagtaatcgaccttgaggaaaccctcagggctctgggg
gtcaacaggaatcagttaatcgatattgcaatctgcgtcggtacggactataacaaagga
ctggaaaaagtaggccctaaaaccgccctcaaactgataaaaaagcatggagatatccat
gccgtgctccgggaaaaagaagtagaaatcgaaggcctggacagaataagggaacttttt
atccatcctgaagtaaccgacaactacgaaattaaatggacaaagccggattccgaaaaa
ctcatcaaattcctatcagagaagaacgacttctccgcagagagggtggaaaaagctgca
gaacgccttaaagcagtgtcaggagcaaggcagaaaaccctcgaccagtggttttga

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