Methanosarcina siciliae HI350: MSSIH_3478
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Entry
MSSIH_3478 CDS
T03864
Name
(GenBank) Signal recognition particle 54 kDa protein
KO
K03110
fused signal recognition particle receptor
Organism
msz
Methanosarcina siciliae HI350
Pathway
msz02024
Quorum sensing
msz03060
Protein export
msz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MSSIH_3478
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MSSIH_3478
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSSIH_3478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
msz02044
]
MSSIH_3478
Secretion system [BR:
msz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MSSIH_3478
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP54_N
Zeta_toxin
AAA_30
APS_kinase
ABC_tran
AAA_22
AAA_17
Thymidylate_kin
AAA_28
AAA
nSTAND3
AAA_33
MobB
nSTAND_NTPase5
AAA_7
SLFN-g3_helicase
Arf
AAA_19
ResIII
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AKB34168
LinkDB
All DBs
Position
4362584..4363846
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AA seq
420 aa
AA seq
DB search
MDPVFNKFKEKLGSFKKALSKTIDEKAVEVEPVVIEQVPESEESLEEEIEPIIEEEVLEA
ALEAESPEAETETASQAIAHIPIDDLKKAEYRKKLKDRKEVGEIKVEEEKPPEEKKSFFK
KVAPKIGFAQKAKALVFNREVYLDNKDLEEPLWELEMGLLESDLALSVSEAIVESVKNQL
TGTTKRIGSNTGEIVEVALKKAILDVVSANTFDFDEYVKNREKPVHIVFVGINGTGKTTS
ISKITNRLLKSGYSVVLAAGDTFRAGAIDQLGIHASRLGVKMIKHQAGADPAAVIYDAVQ
YAKAHKIDFVLSDTAGRMHTNMNLMAQMEKICRVSSPDLIIFVDEAVAGNDAVERAAQFN
EAVPIDGSILTKIDADAKGGSAISIAYITGKPILFFGVGQGYEDLKKFDPEWFVDQLFNQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgtgttcaacaaatttaaagagaaacttgggagttttaagaaggcgctcagc
aaaacgattgatgaaaaggcagtagaagtcgaaccggtagtcattgagcaggtgcctgaa
agcgaagaaagcctcgaagaggaaattgagccgataattgaggaagaggtccttgaggct
gccctggaagcagaaagtcccgaagctgaaacggaaactgcttctcaggctattgctcat
attccgatagatgatctgaagaaggctgaatacaggaaaaagctcaaagaccgaaaggaa
gtcggagagataaaagtggaggaagaaaagcctcctgaagagaaaaagtcttttttcaaa
aaagtcgccccgaaaatagggtttgcccagaaagctaaagctcttgtatttaacagggaa
gtatatctggacaataaagacctggaagagcctctctgggagctcgagatgggccttctg
gaaagtgaccttgccctatcggtttccgaggctattgtcgagtccgtgaaaaaccagctc
acaggcaccacaaaaaggatcggaagcaataccggggagatagttgaggttgccctgaag
aaagcaatccttgacgtcgtatctgccaatacctttgatttcgatgaatatgtgaaaaac
agggaaaaaccggttcatattgtctttgtagggattaacgggaccgggaaaaccacttcg
atctcaaagataaccaacaggctgcttaaatcagggtattccgtagtccttgctgcggga
gataccttcagggcaggcgctattgaccagcttggaattcatgcaagccgactcggggta
aagatgatcaaacatcaggcaggagccgacccggcagctgttatttatgatgctgtccag
tatgcaaaagcccataagatcgattttgtgctttccgataccgcaggccgtatgcacacg
aacatgaaccttatggcccagatggagaagatctgcagggtaagctctccggaccttatt
atcttcgtggacgaagccgtggccggaaacgatgcggtagaaagggctgcccagtttaat
gaggccgtcccgattgacgggtccatcctgacaaaaatcgatgccgatgcaaaaggagga
tctgccatctccattgcttacattacaggcaaaccgattctctttttcggggttgggcag
gggtatgaagatctgaaaaaattcgatcccgaatggtttgtagaccagcttttcaaccag
taa
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