Methanosarcina siciliae HI350: MSSIH_3556
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Entry
MSSIH_3556 CDS
T03864
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msz03036
]
MSSIH_3556
Chromosome and associated proteins [BR:
msz03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MSSIH_3556
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
Crescentin
Tropomyosin
Motif
Other DBs
NCBI-ProteinID:
AKB34246
UniProt:
A0A0E3LBR8
LinkDB
All DBs
Position
complement(4503676..4507203)
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AA seq
1175 aa
AA seq
DB search
MYIKEIEFVNFKSFGKKVKISFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK
LTDLIYNGDETKKPDFAQVTIRFDNTDRKLPLEIDEVVVSRKVKRTKNAYYSYFYFNGKA
VSLGEIHSQIAKAGVTPEGYNVVMQGDVTQIISMSSVERRKIIDEIAGVAEFDERKQKAL
GELEVVRQQVERVDIILEEVRAQLGKLSGERDQALKYQALKTEKIKFEGYVLLSKLKDAR
TELENVDKELAGKEEHLEKVQVLLDERVKELEALEQALEQISLEIRKKGEDEQLQIKREI
EETKGEISRCVDSIELSESELEDADAKRRKAFVDIDATKGKVKELEEKIEAENVRKESIS
SELSERKTERMLLQSRIADVDARFAATRDELMAARKKLEDVKNEKNELIRNEDRLLDTLR
RKSSELRDIENQIKDAEAAVTASDSDTLSVQYEIEKLTGNLESLIKDRDDIESSHFRIKE
DIRKLEGRLHSLQQEYAIAEARVRASEHGGGYSRAVEMVIGASRQNELFGIHGTIAQLGK
VDRRYASALEVAAGNRMQAVVVDNDGDAAEAIEFLKRRKGGRATFLPLNKMRDSRRLGSL
NYENGVIGYAIDLIEFDPEFEPAFWYVFQDTLVMEDLASARRLMGKARMVTLEGELLEKS
GAMVGGSLSSKSGISFAAAEKDKLLELAEEIKSLDASRNAAISKQDSIESHVFELSRKIR
DCEASISRKELELQEIAGREAKLADLLESKQADLRAIEEARTELRAEMDRVIAEKAEKEA
EASELEAQVVELEAKLADSPLPEINKKAEFVEEEIRRLDGRIRDTEASLNALQLEKEYAE
QKITDAKELIRELDEKKASRREKMGSLKAKISELEALLEEKQKRELQLSDELIGLQKERE
SVQVEYTAVKRRVSTASTTLEKAKQHVLTLTATKSALVDQEKQLLEEIERRGIEESSEVP
SYETVYMRIQAIEEAMRRLEPVNMRAIDEYNEVELRLSDLQGKRDTLFSEREQLLERIDQ
YEQLKRDAFMEAYTSINSNFKAIFYELSDGMGELLLENPDDPFAGGMTLRAQPKEKTLQR
IEAMSGGEKSLTALAFIFAIQQYRPAPFYAFDEIDMFLDGWNVERVSRRVKTSGSKVQFI
VVSLRKPMIQAASRTIGVTMQENNITSITGVKLNG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgtacataaaagaaattgagttcgttaatttcaagtccttcggaaaaaaagtaaagatt
tccttttacaatgactttaccactatttccggtccaaacgggagtgggaagtcgaacatc
atagacgggattctctttgcactcgggcttacaagctccaggaccctccgggctgaaaaa
cttacggatcttatttacaatggggatgagacaaaaaagcccgattttgcccaggttacg
atccgttttgacaatactgaccgcaagctgccgttagagattgatgaggttgtggtctca
agaaaggtcaagcggacaaaaaatgcgtattacagctacttttactttaacggaaaagcc
gtgagcctgggagaaatccattcccagattgcaaaggcgggagtaacgcctgaaggttac
aatgtggtgatgcagggagatgtcacacagatcatctccatgagctctgtggaaaggcga
aagattattgatgagattgccggagttgcggagtttgatgagcgcaagcaaaaggctctc
ggcgagctggaggtcgtccggcagcaggtcgaacgcgtggacatcattcttgaagaggtg
cgtgcccagcttggaaaactctccggggaacgagaccaggccctgaaatatcaggctctg
aaaactgaaaaaatcaaatttgaaggttatgtcctgctctccaagctcaaggatgccaga
accgaactggaaaatgtggacaaagaacttgcaggcaaagaagagcaccttgaaaaagtt
caggttttgctggatgagagggtaaaggaattagaagcccttgaacaggcccttgaacaa
atttcccttgaaatccggaaaaaaggggaagatgagcagctgcagatcaaaagggaaatc
gaagagaccaaaggggaaatttcccgctgtgtggatagcatcgaactttcggaatccgaa
cttgaggatgctgacgcaaagcgcagaaaagcttttgttgacatcgacgccacaaaaggc
aaggtgaaggagctcgaagagaaaatcgaagctgaaaatgtgagaaaagagagcatttca
tccgagctatccgagagaaaaaccgagcgtatgctgcttcagagcaggattgcggatgtg
gatgccaggtttgcggcaacaagagacgagctcatggctgctcgcaagaaacttgaggac
gttaaaaacgagaaaaacgagcttatccgcaatgaggaccggctccttgatactctccga
agaaaatcctcggaactgagggatattgaaaaccagatcaaggatgccgaagctgcagtt
actgcctctgacagtgatacgctttctgtccagtatgagatcgagaaacttacgggaaac
ctggaatcccttataaaagaccgggacgacatcgagagcagccatttcaggataaaggaa
gacatcaggaaacttgagggaaggctgcacagcctccagcaggaatatgcaattgccgag
gcaagggtccgggcttcggaacatggaggcgggtattcaagggctgtggaaatggtaata
ggggcttcccggcagaatgaacttttcggaattcacgggacgattgcccagctcggaaaa
gttgaccgcaggtatgcgtcagctcttgaggttgcagcagggaacaggatgcaagcagtt
gttgtggataacgacggagatgctgctgaagcaatcgagtttcttaagaggagaaagggc
ggaagggctactttcctgccgcttaacaaaatgagggattcaaggcggcttggaagcctc
aattatgaaaatggtgtaataggatatgcaatcgatctaattgaatttgaccccgagttc
gaacccgctttctggtatgtttttcaggatacccttgttatggaagaccttgccagtgcc
cgccgcctgatgggaaaggcgagaatggtcactcttgaaggggagcttcttgaaaagagc
ggggcaatggttgggggttctctctcttcaaaatccgggatctcttttgcagccgcagaa
aaagataaacttcttgaacttgcagaagagattaaatctcttgacgcaagccggaatgca
gcgatcagtaaacaggacagcattgaaagccacgtttttgagctgagcaggaaaatccgc
gactgtgaagccagcatttccagaaaagaactcgagcttcaggaaattgccggcagggaa
gcaaaacttgccgacctcctagagtccaaacaggcagatttgagggcaattgaagaggca
aggacggaactcagggctgaaatggacagggtaattgcggaaaaggctgaaaaagaggca
gaggcttccgaacttgaggctcaggttgtcgaacttgaggcaaagctggctgattcccct
ctccccgagatcaacaaaaaagccgagtttgtggaagaggaaatccggaggcttgatggc
aggatcagggataccgaagccagcctgaatgccctgcagcttgaaaaagagtatgctgag
cagaagattaccgatgcaaaggagcttatcagggaacttgatgaaaagaaagcttcaagg
cgggaaaaaatgggttctcttaaggcaaagatttcggaacttgaagcactgcttgaagag
aaacagaaacgggaacttcagctttccgatgaacttatagggctccagaaggaaagggaa
agtgttcaggttgaatacactgcagtaaagcgtagggtcagtacagcttcaactactctg
gaaaaggcaaagcaacatgtccttacacttacagctactaaaagtgcccttgttgaccag
gaaaagcaactgcttgaagagatcgagaggaggggcatagaagaaagctcagaggtccct
agttacgaaaccgtttacatgaggatccaggcaatcgaagaagctatgcgcaggcttgaa
cccgtaaacatgcgggcaatcgatgagtataatgaggttgaactccggctttccgacctg
cagggtaaacgcgacacgctcttttccgaaagggaacagctccttgaacgcatcgaccag
tacgagcagctcaaacgggacgcctttatggaagcttatacgagtataaattccaatttc
aaggccattttctacgagctttccgacggcatgggtgaactcctgctggaaaatcccgac
gatccctttgcaggaggaatgaccctcagagcccagccaaaagaaaagaccctccagcgc
atagaagctatgtccggaggagaaaagagtcttacggcacttgctttcatctttgcaatc
cagcaataccgccctgctcctttctacgcctttgacgaaatcgacatgttccttgacggc
tggaatgtggaaagggtttcaaggagggttaaaacttcaggctcaaaagtccagttcatc
gttgtttccttaagaaaacccatgatccaggctgcaagccggacgatcggggttacaatg
caggagaataatatcacgagcattaccggagtgaagcttaatggctga
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