Methanosarcina siciliae HI350: MSSIH_3861
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Entry
MSSIH_3861 CDS
T03864
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
msz
Methanosarcina siciliae HI350
Pathway
msz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSSIH_3861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msz03019
]
MSSIH_3861
03012 Translation factors [BR:
msz03012
]
MSSIH_3861
Messenger RNA biogenesis [BR:
msz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSSIH_3861
Translation factors [BR:
msz03012
]
Eukaryotic type
Release factors
MSSIH_3861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
Zn_ribbon_8
Zn_ribbon_LysW
Zn_ribbon_TFIIB
SLX1_C
Motif
Other DBs
NCBI-ProteinID:
AKB34551
UniProt:
A0A0E3LBX9
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All DBs
Position
4885093..4886340
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AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLESLRDKKGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPDNGIVYFTGAIDIGANKTSMESEVIIPPEPITVYKY
HCDSSFYLEPLEDMLKDKSTFGLLVLDRREATVGLLVGKRIQAFRNLTSTVPGKQRKGGQ
SAHRFQQLRLIAIHDFYKRIGDAASEIFLAIDHKDLKGVLIGGPSPTKEEFYGGEFLHHE
LQKKILGLFDTAYTDESGLSELVNAAGEKLQDLELMGQKNAVRDFFKELIADSGKVAYGE
AQVRANLEINAVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGEPAPTAGNCPKCGS
SLEVTDVVDVVDEFSELADKSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYSTGI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatccgcacacgagaaatacgaatttaaaaagaagcttgaaagcctcagg
gataaaaaaggaaggagcacggagcttatttccctttatatccctgctgacaagcagatt
ttcgatgtcacaaaccagttaaaagacgagcacgggcaggctgcaaacataaagtccaag
cttacgaggacgaatgtgcagggagcaattgaatctctgctctcaaggctcagatacctg
gataaagtgcctgataacgggatagtgtactttacaggggctatagacatcggagccaac
aagacaagcatggaaagcgaagtaatcattccacccgaacccattactgtctacaagtac
cactgtgactcatctttctaccttgagcctcttgaggatatgctcaaggataagagcact
ttcgggcttcttgtccttgaccgcagagaagcgaccgtagggcttctggtcggaaaaaga
atacaggccttccgcaacctgacctcaacggtcccgggaaagcagagaaaaggtggtcag
agtgcccaccgtttccagcagctcaggctcatcgcaatccatgacttctataaaaggata
ggagatgccgcaagtgagatcttcctcgctatagaccataaagacctcaaaggcgttctg
ataggagggccttctccgacaaaggaagagttctacggaggagagttcctgcaccacgag
ctccagaaaaaaattctcgggctctttgatacggcatatactgacgaatccggactttcc
gagctcgttaatgctgcaggggaaaagcttcaggatcttgaactcatggggcagaagaat
gccgtcagagactttttcaaggaactgattgccgattcggggaaggtagcttacggagaa
gcccaggtcagggcaaacctcgagatcaatgcggtggatgtgcttctgctctccgaagat
cttcgggcagaaagggtaaccacgaaatgcagtgtctgcggatacgaaaataagtggaca
cggcgctggaagcccggagagcctgcccctacagccgggaactgccccaagtgcggttct
tcccttgaggttacggatgttgttgacgttgtggacgaattctcagagcttgccgacaag
agcaatgcaaaggtggtcttcgtgtccacagactttgacgagggttcccagctaatgaat
gctttcggaggcattgctgcaatcctgaggtacagtaccgggatctga
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