Methylocaldum szegediense: MSZNOR_0072
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Entry
MSZNOR_0072 CDS
T09668
Symbol
rng
Name
(GenBank) RNase G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msze03019
]
MSZNOR_0072 (rng)
03009 Ribosome biogenesis [BR:
msze03009
]
MSZNOR_0072 (rng)
Messenger RNA biogenesis [BR:
msze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MSZNOR_0072 (rng)
Ribosome biogenesis [BR:
msze03009
]
Prokaryotic type
rRNA processing factors
MSZNOR_0072 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
CHP02642
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
CAI8719918
UniProt:
A0ABN8X130
LinkDB
All DBs
Position
MSZNORmain:complement(64056..65510)
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AA seq
484 aa
AA seq
DB search
MSDEILINVTLRETRVAFVENGVLQEVMIERTRNRGLVGNIYKGKICRVLPGMQAVFVDI
GLERAAFLHISDLGAVDREKAPTDQIELIFHDGQELVVQVVKDPIGAKGARLTTEIAIPS
VYQVYMPYSRTCGVSQRIECEKERMRLRNVIETFQREHATGGFIARTAAEGVEESALRND
MLFLLKLWNSIAQRIKTVKPKTLLHEDLPLSMRVLRDLHRARVEKIRVDSRETYGRLLKF
AKEFVPELAPLIEHYSGERPLFDLYSVEDEIQKALERRVMLKSGGHLVFDQTEAMTTIDV
NTGAFVGGRSLEETIFKTNLEAAQAIARQLRLRNIGGIIIIDFIDMRDEEHKQQVLHALE
KSLEKDHAKNTISEVSSLGLVEMTRKRTRESLAHILCEPCPACGGRGVLKTPETVCLEIF
REVIREVRQYNVQELLVLASNEVVERLLDEEADTLSELETFLGVRIKFRAEAQYTQEQYD
VVLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaaatactcatcaacgtcacgctgcgggaaacccgcgtcgccttcgtcgaa
aacggcgtcttgcaagaggtcatgatcgagcggacccgcaaccgcgggctggtcggcaac
atctacaaaggcaagatctgccgggtactgccgggcatgcaagcggttttcgtcgacatt
gggctggaacgcgcggcatttctacatatttcagatttaggcgcggtcgatcgcgaaaag
gcaccgaccgaccagatcgagctgatttttcacgacggacaagaactggtcgtacaagtc
gtaaaagaccccattggcgccaagggggcacggctcaccaccgaaatcgcgattccgtcg
gtgtaccaggtctacatgccctatagccgtacctgcggcgtatcgcagcgcatcgagtgt
gaaaaggagaggatgcggctgcgcaacgtgatcgaaacttttcagagagaacacgcgacg
ggcgggttcatcgcgcgcaccgccgcggagggcgtcgaagagtccgcactccgcaacgac
atgctgttcctgctcaagctgtggaactccatcgcgcaacgcatcaagacggtcaagccg
aaaaccctgctgcacgaggacttgccgctcagcatgcgggttctgcgcgatctgcaccgg
gccagagtggaaaagattcgggttgactcgcgtgaaacctacggtcgcctgctcaaattc
gccaaggaattcgtccctgaactagcccccctcatcgaacactattccggcgaacggcct
ttgttcgatctctacagtgtagaagatgaaatccagaaggctctggagcgaagggtcatg
ctcaagtccggtggacatctggtgttcgaccagaccgaggcgatgacgaccatagacgtc
aacacaggtgccttcgtcggcgggcggagcctcgaagagactatcttcaagaccaacctg
gaggcggcacaggccatcgcacggcagctgcggctacgcaacatcggcgggatcatcatc
atcgatttcatcgacatgcgggacgaggaacacaagcagcaggtcctgcacgcactggaa
aaaagcctggaaaaagaccatgccaagaacaccatcagcgaggtgtcttcgctcgggcta
gtggagatgacgcgcaagcgcactcgagaaagcctggcacatatcctgtgcgaaccctgc
cccgcatgcggtggtcggggtgtgctgaaaaccccggagacggtctgcttggagattttc
cgggaagtcattcgcgaagtgcgtcaatataatgttcaggaactcctcgtgctggcatcc
aacgaagtcgtcgagcgcctgctagacgaggaggccgacactttgtcggaactggagacg
ttcctaggggttcgcatcaagttccgtgcggaagcgcagtacacccaggagcaatacgat
gtcgtcctgctttag
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