Methylocaldum szegediense: MSZNOR_0497
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Entry
MSZNOR_0497 CDS
T09668
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msze03021
]
MSZNOR_0497 (nusA)
03009 Ribosome biogenesis [BR:
msze03009
]
MSZNOR_0497 (nusA)
Transcription machinery [BR:
msze03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MSZNOR_0497 (nusA)
Ribosome biogenesis [BR:
msze03009
]
Prokaryotic type
rRNA transcription factors
MSZNOR_0497 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_NusA_1st
KH_NusA_2nd
HHH_5
S1
DUF4332
RNA_pol_A_CTD
KH_NusA_C
KH_KhpA-B
RAD51D_N
S1_2
Motif
Other DBs
NCBI-ProteinID:
CAI8742597
UniProt:
A0ABN8X2F5
LinkDB
All DBs
Position
MSZNORmain:454160..455665
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AA seq
501 aa
AA seq
DB search
MANKEILLVVDVVSNEKDIDKEVIFSAIEDALRTATIKRHDNKIDVRVSIDRKTGDYETF
RRWRVVDFNPDYEAGVENPNVEIALEEARKIRPEVQVGDYIEEPIESIEFGRIAAQTAKQ
VIVQRVRDAERRKVVDAYKSRVGELVTGVVKRVERGNVYLDLGGNVEAFIPRDEMIPREA
VRTGDRLRGYLKAVRPETRGPQLFVSRTAPELLIALFRLEVPEVSEGIIEIKGAARDPGV
RAKVAVKSNDLRLDPVGACVGMRGSRVQAVSNELAGERIDIILWNENDAQFVINAMSPAE
IVSIVVDEDKHSMDIAVADENLSQAIGRGGQNVRLASELTGWTLNVMGASQAEAKNELET
ARIKQSFIEQLDVDESIAEILVREGFSTVEELAYVPAKELLEIEEFDTEIVEELRNRARD
ALLIKAIANEEVFETSEPSKELLEMEGMDRELAFRLAARGVRTVEDLAEQSVDELLDIEG
MDEARAASLIMKARSPWFAEG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaagaaatcttgttggtagtggatgttgtatccaatgagaaagacatcgat
aaagaggttattttcagcgctatagaggacgcccttcgcaccgcgacaatcaagcgtcac
gacaacaagatcgatgtccgcgtgtcgatcgaccggaaaaccggggattatgaaaccttc
cgccgttggcgggtcgtcgactttaacccggattacgaagcaggcgtggaaaatccgaat
gtcgagattgccttggaagaggcacgaaagattcggcccgaagttcaagtcggggattat
atcgaagagcctatcgagtcgatcgagttcgggcgcatcgccgcgcaaaccgccaagcag
gtgatcgtgcagcgagtacgggatgcggaacgccgcaaggtggtcgatgcctacaagagt
cgggtgggcgaacttgtaacaggcgtggtcaagcgcgtggagcggggtaatgtttatctc
gatctgggcgggaacgtcgaggcgtttattcctagagacgaaatgattccacgcgaggcg
gtgcgaacaggcgatcgcttgcgaggctatttgaaagctgtgcgtccggaaacgcgtgga
cctcaattgtttgttagtcgtactgcgccggagcttttgatcgccttgttcagattggag
gttcccgaggtaagcgaagggattatcgaaatcaaaggagcggcgcgagatcccggggtt
cgcgctaaagtcgcggtaaaaagcaatgatctgcggctggatccggtgggtgcatgcgta
ggcatgcgcggttcgcgtgtccaagcggtctcgaatgagctggctggtgaacgcatcgat
atcattttgtggaacgagaatgatgctcaattcgtgatcaacgccatgtctccggcggag
atcgtttccatcgttgtcgacgaagacaagcattcgatggatatcgcggtcgccgatgaa
aatctgtctcaggcgatcgggcgtggcggacagaacgtgcgtctggcgtcagagctgact
ggatggacacttaacgttatgggggcctctcaggcggaagccaagaatgagcttgaaacg
gccaggatcaagcagtccttcatcgagcaattggatgtggacgaaagtatcgctgagatc
ttggtaagggaaggattctcgacggtcgaagaactggcttacgttccggctaaggagctc
ctggagatcgaagaattcgacactgaaatcgtcgaggaattgcgaaatcgtgcacgcgat
gccttgctgatcaaggctatcgctaatgaagaggtgttcgaaacttcggagccgtccaag
gaattactcgagatggaaggaatggaccgggagttggcttttcgccttgccgctcgaggt
gtgcggacggtcgaggatttggccgaacaatcggtcgacgaattgctggacattgaaggt
atggacgaagcaagggctgcgagtttgatcatgaaagcccgttctccgtggtttgctgaa
ggttaa
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