Methylocaldum szegediense: MSZNOR_0500
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Entry
MSZNOR_0500 CDS
T09668
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msze03016
]
MSZNOR_0500 (truB)
Enzymes [BR:
msze01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSZNOR_0500 (truB)
Transfer RNA biogenesis [BR:
msze03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSZNOR_0500 (truB)
Prokaryotic type
MSZNOR_0500 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Sas-6_helical
Motif
Other DBs
NCBI-ProteinID:
CAI8742718
UniProt:
A0ABN8X074
LinkDB
All DBs
Position
MSZNORmain:458753..459685
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AA seq
310 aa
AA seq
DB search
MSRRSDLYSINGVLLLDKTAGMTSNAALQKVKRLLKARKAGHTGSLDPLASGLLPICLGE
ATKLSGFLLNTDKRYRVRVRLGVTTLTGDSEGEIVETCPVPPLDERVIEQALTRFRGEIL
QIPPMYSALKHQGRRLYDLARQGIEVEREARRVTISELKLVNFDSTSLDLDVACSKGTYI
RTLAEDIGKSLGCGGHVEVLRRTGVGGLSVADAYTLSYMESLNADELLKLVLPMDRIVVD
LPAVRLSEELGFYVRRGQAVLVPNAPLQGWVRLYAKPSVFMGVGEILDDGRVAPRRLVKV
ARDASRELIH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcgcagcgatttgtactccattaacggggttttgctgttggacaaaaccgca
ggtatgacgtcgaatgcggcgctgcaaaaggtcaaacggcttttgaaggcccgaaaagcc
ggtcataccggcagcctggatccgctcgccagtggtttgctcccgatttgtcttggtgaa
gcaacgaaattatcaggattcctcctgaatacggacaaacgctatagggtccgggtgcgg
ctgggagtaacgacgcttaccggtgattccgagggcgagattgtcgagacttgcccggtt
ccgcctttggacgagagggtgatcgaacaggcgctcacgcgttttcgcggtgagattctt
cagattccgcctatgtattcagcgctgaagcaccaaggtcgacgcctgtatgatttggct
cgtcagggaatcgaagtggagcgagaagcccgtcgtgtgaccatttctgagctgaagctt
gtgaacttcgattcgacgagtctggacctggacgttgcatgctcaaaaggtacttatatt
cgcacccttgccgaggatattggtaaatcgctcggctgcggtggccatgtcgaggtgctg
agacgtactggtgtgggcggtttatcggttgccgacgcttatacgctgtcctacatggaa
tcactgaacgccgacgaattgttgaaattggttctgccgatggatcgtatcgtcgtcgat
ttgccagcggtgaggttaagcgaggaactgggcttttatgtacggaggggacaagcggtt
ctggttccgaatgccccgcttcaaggatgggtcagattatatgcaaaaccgtccgtgttc
atgggagtgggcgagattcttgacgacggaagggtagcccctcgtcgtttggtcaaggtg
gctcgggacgcgtctcgggagttgattcattag
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