Methylocaldum szegediense: MSZNOR_0711
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Entry
MSZNOR_0711 CDS
T09668
Symbol
zraR
Name
(GenBank) DNA-binding transcriptional activator ZraR
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
msze
Methylocaldum szegediense
Pathway
msze02020
Two-component system
msze02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MSZNOR_0711 (zraR)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MSZNOR_0711 (zraR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msze03000
]
MSZNOR_0711 (zraR)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
msze02035
]
MSZNOR_0711 (zraR)
Transcription factors [BR:
msze03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSZNOR_0711 (zraR)
Bacterial motility proteins [BR:
msze02035
]
Flagellar system
Flagellar assembly proteins
Others
MSZNOR_0711 (zraR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
FleQ
AAA_5
AAA_16
bpMoxR
AAA_7
nSTAND3
HTH_50
AmiR_N
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAI8754334
LinkDB
All DBs
Position
MSZNORmain:653933..655339
Genome browser
AA seq
468 aa
AA seq
DB search
MGLRRILLVQSEDTLYSELSIVLKFLECDVVMRRLDALEEETDAEFDAVFIGVGKDVEQV
VLKTVELYRHVPLVLVMDKTSPRPLASGLESRATAVVAWPANYATLSACLDKLGGGAPEV
TSVRPPELFRSLTGSSTAIQRTRKLIQQVAPSDATVLILGESGTGKEVIARNLHYYSPRR
SKPFVPVNCGAIPGELLESELFGHEKGAFTGALSSRQGRFEMAEGGTLFLDEIGDMPLPM
QVKLLRVLQERCFERVGSNKTIYCDVRIIAATHRNLEDEIGRNRFREDLYYRLNVFPIEV
PSLRDRLEDVPALVEDLTARLRAEKRGDLRLTPAALRALQRYHWPGNVRELANLIERLAI
LYPNSVVDAADLPEKFQQYVKPEDAAPRRRLQGETTASTEGLGIVRLPGEGLDLREHLNN
LECELIRQALDECNGVVAHAANLLRMRRTTLVEKLRKYGLRGEETTVI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgcgccgaattttattagtccaaagcgaggacactctatattccgagctgagc
atagttctgaagttcctcgagtgtgacgtcgttatgcgccgcctggatgccctcgaggag
gaaacggatgctgaattcgacgccgtgttcatcggcgtgggcaaggatgtcgagcaggtg
gttttgaagacggtggagctttataggcatgttccgctcgtcctggtgatggacaagact
tcgcccagaccgctggcgagcggtctggaaagtagagccaccgccgttgtggcatggccg
gccaattacgccacgttgagcgcctgtctcgataaactcggaggcggtgcgcccgaagtc
acgagcgtccgcccgccggagttgttccgcagtttgacggggtcgagcacggcaatacag
cgcacgcgcaagctcatccagcaggtcgcgccgtccgacgcgacggttctcatccttggg
gaatcaggcacgggaaaggaggtaatcgcccgcaacctgcattactattcgccccgtcga
agcaagcctttcgtaccggtcaattgcggcgccatacccggcgaattgctggaaagcgag
cttttcggccacgagaagggtgccttcaccggagcgctgagctcccgccaggggcgtttc
gaaatggccgaaggcggcaccctttttctggacgaaatcggcgatatgcccttgccgatg
caggtcaagctcctgagagtcttgcaggaacgctgtttcgagcgggtcggtagcaacaaa
acgatttattgcgatgtacgcatcattgcggcgactcaccgcaatttggaagatgagatc
ggtcgaaaccggttccgggaagacctctattaccgtctcaacgtctttccgatcgaggtt
ccttcgttacgcgacagactggaagatgtgccggctctcgtggaggatctgaccgcccgt
cttagagccgagaagcgcggtgatctgcgactcaccccggcggcactccgagcgcttcag
cgctatcactggcccggcaatgtccgcgaactagccaacttgatcgagcgtctggcgatt
ttgtatccgaacagcgtggttgatgcggccgatctgccggaaaaattccagcagtacgtc
aaaccggaagacgctgctccgaggcgccggctccagggcgagaccaccgcctctaccgag
gggctggggattgtccggttacccggggaaggcttggacttgcgcgaacacctcaacaat
ctggaatgcgaattgatcagacaggctttggatgaatgtaacggcgttgtggctcatgcc
gccaaccttctcagaatgcggcgtaccaccctggtcgagaaattgcggaaatacggcctg
cggggcgaggaaacgacggtaatttga
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