Methylocaldum szegediense: MSZNOR_1133
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Entry
MSZNOR_1133 CDS
T09668
Symbol
rnc
Name
(GenBank) RNase III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
msze
Methylocaldum szegediense
Pathway
msze03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSZNOR_1133 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msze03019
]
MSZNOR_1133 (rnc)
03009 Ribosome biogenesis [BR:
msze03009
]
MSZNOR_1133 (rnc)
03036 Chromosome and associated proteins [BR:
msze03036
]
MSZNOR_1133 (rnc)
Enzymes [BR:
msze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MSZNOR_1133 (rnc)
Messenger RNA biogenesis [BR:
msze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MSZNOR_1133 (rnc)
Ribosome biogenesis [BR:
msze03009
]
Eukaryotic type
90S particles
RNase
MSZNOR_1133 (rnc)
Prokaryotic type
rRNA processing factors
MSZNOR_1133 (rnc)
Chromosome and associated proteins [BR:
msze03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MSZNOR_1133 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
PWWP_KDM3B
Motif
Other DBs
NCBI-ProteinID:
CAI8776446
UniProt:
A0ABM9HZ82
LinkDB
All DBs
Position
MSZNORmain:1051199..1051912
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AA seq
237 aa
AA seq
DB search
MNLDGLVEILEPEKIARKLGLHFNNPALVKRALTHRSAESDNNERLEFLGDSVLGFVIAE
KLYDKFSEADEGVLSRLRATLVNQASLAELARKLNLGDYLVLGSGELKSGGYRRDSILSD
ALEAVIGALLIDQGMDACRKWILKLFAEPIDRLSLQDWKKDPKTRLQELMQARGVELPTY
TLKAVSGQPHDQSFCVECRVSLIPVSCEGVGSSRKKAEQQAAEKMLALLAEKLGFKP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctagatggtttggttgagatattggaaccggagaaaatcgcaagaaagctgggc
ttgcacttcaataacccagccttggttaagagggccttgacccacaggagcgccgagagc
gataacaacgaacgccttgagttcctgggcgattctgtgctcggatttgtgatcgcagag
aagctctatgacaagttctctgaggccgacgaaggcgtgctcagccggctgcgcgccacg
ctcgtgaatcaggcttcattggcggaactggcgcgtaaattgaacctgggcgattacctc
gtcttgggctcgggtgagctgaaaagcggcggatatcggcgcgattcgattttatccgac
gccttagaggctgtgatcggcgcgctgctcatcgaccaagggatggatgcctgtcggaag
tggatattgaagctttttgccgagccgatagaccgtctttcactgcaggattggaaaaag
gatccgaagacccggctgcaggaattgatgcaagcgcgaggcgttgaattgccaacctac
acactaaaggcggttagcggccagccgcacgatcagagcttttgcgtggagtgccgtgtg
tcgctgattccggtttcctgcgaaggcgttggctcttcacggaaaaaggcggagcagcaa
gcggcggaaaagatgttggccctgctggcggaaaaactggggttcaaaccgtga
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