Methylocaldum szegediense: MSZNOR_1489
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Entry
MSZNOR_1489 CDS
T09668
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00300
Lysine biosynthesis
msze00470
D-Amino acid metabolism
msze01100
Metabolic pathways
msze01110
Biosynthesis of secondary metabolites
msze01120
Microbial metabolism in diverse environments
msze01230
Biosynthesis of amino acids
Module
msze_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSZNOR_1489 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSZNOR_1489 (dapF)
Enzymes [BR:
msze01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MSZNOR_1489 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAI8795774
UniProt:
A0ABN8X0H7
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All DBs
Position
MSZNORmain:1420152..1420982
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AA seq
276 aa
AA seq
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MALKFTKMHGLGNDFVVFDGVRQNVSLTPENVRRIADRHFGIGCDQVLIVEPPISWNADF
RYRIFNADGGEVAQCGNGARCFARFVRDQGLCDKDEIVVDTDAGQLRLVHRSDGLVTVNM
GIPKHAPAEIPLDIADEAVSYEVVLDGNAWSFGAVSMGNPHAVLRVDDIDHAPVERLGPL
LERHPIFPERANIGFAQVVDRHRIKLRVFERGSGETLACGSGACAATVVGIEQDEIESPV
QVDLPGGSLYIAWEGRGRPVFMTGPAVCVFEGEIEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagttcaccaaaatgcatggactcggcaacgacttcgttgtgttcgacggt
gtacgtcagaacgtttctttaacacccgagaacgttcgccgtattgcagaccggcacttt
ggcatcggctgtgaccaagttctgatcgtcgaaccgcctatcagctggaacgccgacttt
cgctatcgtattttcaatgcagatggcggagaagttgcgcaatgcggaaacggtgctcgt
tgcttcgcgcgtttcgttcgcgatcaaggcttatgcgacaaagacgaaatcgtggtcgat
accgatgccggccaattgcgtttagtccatagaagcgacggtctggttacggttaatatg
gggattcctaagcatgcgcctgcggaaatcccgctggatatagccgacgaggcggtgtct
tatgaggttgtcctggacggaaacgcttggtctttcggcgcggtttcgatgggcaacccg
cacgccgtgctcagggtcgatgacatcgaccatgcgccggtcgaacgattgggtccgctt
ttggaacggcatccgatcttcccagagagggcgaacatcggttttgcccaggtcgtggac
cgacaccgtatcaagcttcgcgttttcgagcggggttcaggcgagaccctagcctgcggt
agcggagcctgtgccgcgaccgtcgtcggcatagaacaggatgagatcgagagtccggta
caagtggaccttcccggcggttctctttacatagcctgggaagggagggggaggccggtg
tttatgaccgggccggccgtttgcgtgttcgagggcgaaatcgaattatga
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