Methylocaldum szegediense: MSZNOR_1537
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Entry
MSZNOR_1537 CDS
T09668
Name
(GenBank) type VI secretion system protein
Organism
msze
Methylocaldum szegediense
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_FHA_C
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-ProteinID:
CAI8798227
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Position
MSZNORmain:complement(1469005..1470753)
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AA seq
582 aa
AA seq
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MITIVYAYCLAIRGSTEARIMALILKVLSYKGSPVAEATSCTFDQEGGSIGRSPDNRFVL
PDPDKFISRKHGSIEFRNGVYSFTDSSTAGTYFVNKDMLLQHDTAPLSNGDVLRIGEYEI
AVVEVPMPPGPQDEPSFGFDPFGEPPESPNEPLFSFGPFGKPPAPPEEPSFDFDPFGEPP
VPPAAPVPEPEAWAETPAWSSPFDLPPAETDKPQSSGPSFIGQPDVSPFHESFIPPDVEK
PQESPELDFNFEDLLRDLDSGGQGPEMPAPVAESWEPEDDFFKGIDLSGLGPEPDATVEP
QAMTEPAPDFGPAAESVEAAHPPSAENLVSHEQAAVVPSEEPAPSRATVPAIDAWVDSPV
GGSSLAAAESVSASPPVPSVPSGPAATHTADRGLFAAFLEGAGIASNTGWIKDEDMPAVM
KTVGVLLRSFVEGMMTVMRARAELKSQFRVSVTTMRPVENNPLKFTPNVDDALKIMLAQN
HPGFMDPVEAVRGGFADLMNHQMAMTAGIQAALAAALKRFDPQRFEKLYEEGIVFQRKAK
CWEAYSKAYPESVNDILENFFGEEFGEVYERQMRILQSAQTR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgattacgattgtctatgcttattgcttggcaatcaggggctcgaccgaagcacgcatc
atggcactgatcctcaaagttctcagttataagggctcacccgtcgcggaggcgacgtcc
tgtaccttcgaccaggaaggcggctccataggacgctcgccggacaaccgcttcgtcttg
cccgatccagacaagttcatttcccgcaaacacggttcgatcgaatttcggaacggtgtc
tactcgttcaccgactcgagtaccgccgggacctatttcgtcaataaggatatgctcctt
cagcatgacactgcgccactgtcgaatggcgatgtgctgaggatcggcgaatatgaaatc
gccgttgtcgaagtccctatgccgccgggaccgcaggacgagccgtcgttcggttttgac
ccgtttggggagccaccggaatcgccgaatgaaccactgttcagtttcggtccgttcgga
aagccgccggcacctccggaggagccttcgttcgatttcgacccgttcggagagccgccg
gtgccgcccgcagcccccgtgccggaacctgaggcatgggctgaaacgccggcgtggtct
tccccgttcgaccttccaccagcggaaaccgataaaccgcagtcgtcggggccgagtttc
atcggccagccggatgtatcgccgttccacgaaagtttcattccgcccgatgtcgaaaag
ccgcaggaatcgccggagctcgattttaatttcgaagacctcctgcgcgatctggattcg
ggcggacaggggccggaaatgcctgcgcccgtcgccgaaagctgggagccagaggacgat
ttcttcaaagggatcgatttgagcggtcttggcccggaaccggacgcaaccgtcgagccg
caagccatgacggaaccagcgccggatttcggaccggcagccgaatccgtggaagccgca
catccgccgagtgccgagaacctcgtttcccacgagcaagcggctgtagtgccgtccgag
gagccagctccatctcgcgcgaccgttccggcgatcgatgcctgggtagattcgcctgtc
ggcggttcatcgctcgccgctgcggaatcggtttccgccagtccgcccgttccttccgtt
ccttccggcccagcagcaacgcacacggctgaccggggtctgtttgctgctttcctggaa
ggggccggaattgcctccaataccggatggatcaaagatgaggacatgccggcagttatg
aaaaccgtcggggtcctgctccgctcctttgttgaaggcatgatgaccgtcatgcgggca
cgagccgagttgaaaagccagttccgtgtctcggtgaccactatgcggccggttgagaat
aacccgctaaaatttaccccgaacgtggatgacgcgctcaagatcatgctggcgcaaaac
catccgggattcatggatcccgtggaagccgtgcggggagggtttgccgacctcatgaat
catcagatggcgatgacggcgggcatacaggcggcgctggcggcggctctgaagcggttc
gatcctcaacggttcgagaagctgtatgaggagggcatcgtctttcaaaggaaggcgaaa
tgctgggaggcctacagcaaggcgtatcctgagtcggtcaacgatattttggagaacttc
ttcggggaggaattcggggaagtctacgagcgccagatgcgaatactgcaatcggctcaa
acccgataa
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