Methylocaldum szegediense: MSZNOR_1622
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Entry
MSZNOR_1622 CDS
T09668
Symbol
apxIB
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
msze
Methylocaldum szegediense
Pathway
msze02010
ABC transporters
msze03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSZNOR_1622 (apxIB)
03070 Bacterial secretion system
MSZNOR_1622 (apxIB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msze02000
]
MSZNOR_1622 (apxIB)
02044 Secretion system [BR:
msze02044
]
MSZNOR_1622 (apxIB)
Transporters [BR:
msze02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSZNOR_1622 (apxIB)
Secretion system [BR:
msze02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
MSZNOR_1622 (apxIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
MeaB
DUF87
NB-ARC
AAA_18
AAA_21
KAP_NTPase
PRK
Motif
Other DBs
NCBI-ProteinID:
CAI8802744
LinkDB
All DBs
Position
MSZNORmain:complement(1548562..1550721)
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AA seq
719 aa
AA seq
DB search
MVLFEPKHAKMEDKSTRQAPDTGLACLVMLARFHGVAADPGQLRHRFGEGSRPFGVTEIL
LAAKQLGLKAKTVKTDFSRLANTPLPALAIGRGDDFFILARSDNEKVLIHDPSRERPEVV
ARDDLESRWTGDLILFASRAFLAGEFAKFDFTWFIPAIVKYRKLLGEVLLASFVLQLFAL
VTPLFFQVVMDKVLVHRGLTTLDVIVVGLLIVSIFEVVLSGLRSYVFAHTTSRIDVELGA
RLFRHLLSLPLSYFQARRVGDSVARVRELEHIRSFLTGNAVTLVLDLFFAVVFIAVMLYY
SGWLTLVVVASLPLYGLLSLSVTPLLRARLHEKFNRGAENQALLVEAIAGIDTVKAMAVE
PQMIRRWDRQLAAYVSASFRTATLATIAHEGVALIGKLVTAATLWLGARLVIEGELTVGQ
LVAFNMLAGRVSQPIMRLAQLWTDFQQTGISVQRLGDILNSRSELSSANRSTLPPLQGRI
EFDRVSFRYRPDGPEVLREVSLSIAPGQVIGIVGRSGSGKSTLTKLIQRLYVPERGRILV
DGMDLALADPSSLRRQIGVVLQENVLFNATIRENIALADPGLPVEAVIGAAKLAGAHDFI
LELPEGYDTVVGEHGATLSGGQRQRIAIARALIANPRILIFDEATSALDYESERVIQNNM
KAICQGRTVIIIAHRLSAVRQAHRILVLDRGQLVEEGTHDELLARQAGHYARLYRLQQA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggttctgtttgaacccaaacatgcaaaaatggaagacaaatccacgcgacaggcgccg
gacacggggctcgcttgtctcgtgatgctggcccgttttcacggcgtcgcggctgatccg
gggcaattgcggcataggttcggggagggaagccgaccatttggcgtcaccgagatcctg
ctcgccgccaaacaattggggctcaaagccaagaccgtcaagaccgacttttcgcgcctc
gccaatacgccgctgccagcgcttgcgatcgggcggggggacgacttcttcattctcgca
aggagcgacaacgagaaagtcctgatccacgatccctcgcgggaacggccggaggtcgtt
gcccgagacgacctggaatcgcgctggacgggagatttgatcctatttgcctcaagagct
ttcctggccggcgaattcgccaaattcgacttcacctggttcattccagcgatcgtcaaa
taccggaagctgctcggtgaagttttactggcgtcgttcgtcctgcaactgttcgccttg
gtgacgccgcttttttttcaggttgtcatggacaaggtgctggtacaccggggtctgacg
accctagacgtaatcgttgttggtcttctgatcgtctcgatcttcgaggtggtcctaagc
gggctgcgcagctatgtgttcgcacacaccacgagccgcatcgacgtggaactcggagct
cggcttttccggcaccttttgagcctgccgcttagttattttcaggcccggcgggtcggg
gattcggtcgcgagggtacgggagctcgaacatatccgctccttcctgaccggcaacgcc
gtgaccctcgtactggacctatttttcgcggtggtgttcatcgcggtcatgctgtactac
agcggctggctgaccctggtcgtggtggcttccttgccgctctatggccttctttcactg
tcggtcacgccgctgcttcgagcgcggcttcacgagaagttcaatcgcggtgcggaaaat
caggcgctgctggtggaagcgatcgccgggatcgacacggtgaaggctatggcggtggaa
ccgcagatgatccgccgctgggaccgccaactcgcggcgtacgtctccgccagtttcagg
accgcgaccttagccacgattgcccacgagggggttgcgctgatcggcaagctggtgacg
gccgctaccctgtggctgggcgcccggctggtcatcgaaggcgagttgaccgtcggccaa
ctcgtcgcgttcaacatgctggccgggcgggtgtcgcagcccatcatgcggctggctcaa
ttgtggacggacttccaacaaaccggcatttcggtccaacgactgggcgatattctcaat
agccgtagcgaattgtcctccgccaaccgctcgaccttgccaccgttgcagggtcggatc
gaattcgatcgggtgagcttccgctatcggcccgacggtccggaagtgctgcgggaagtg
agtctctcgattgcgccgggacaagtgatcggcatcgtcggccgctccggatccggcaag
agcaccttgaccaaactcattcagcgcctttacgtacccgaacgcggtcgtatccttgtc
gacggcatggacttggcgctcgccgatccgtcatccttgcgccgtcagatcggcgtggtg
ttacaggagaacgtcctcttcaacgccacgattcgggagaatatcgccctggccgatccg
ggcctgcccgttgaggcggtgatcggagcggcgaaactggccggcgctcatgacttcatc
ctggaattacccgaaggctatgacacggtcgtgggcgagcacggggcgacactgtcgggc
ggccagcgtcagcggatcgccatcgcccgcgccctgatcgcgaatccccgtatcctcatt
ttcgacgaggcgaccagtgcgctggattacgaatcggagcgggtcattcagaacaacatg
aaggcgatatgccagggacggaccgtcatcatcatcgctcatcggttgtccgccgtgcgc
caagcccaccggattctggtgctcgaccgcggtcagctcgtggaagagggcacgcatgac
gagctcctggcccgccaagcggggcactacgcccggttgtatcgtctgcaacaggcgtga
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