Methylocaldum szegediense: MSZNOR_1652
Help
Entry
MSZNOR_1652 CDS
T09668
Name
(GenBank) TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msze03000
]
MSZNOR_1652
Transcription factors [BR:
msze03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MSZNOR_1652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_13
TetR_C_13_2
TetR_N
TetR_C_11
TetR_C_43
TetR_C_6
TetR_C_44
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
CAI8804304
LinkDB
All DBs
Position
MSZNORmain:complement(1583052..1583657)
Genome browser
AA seq
201 aa
AA seq
DB search
MARIGNKQITREKLLDQGVAMIMERGYHGTGLQDLLSSVKVPKGSFYNYFASKDEFGAEV
VQHYIEPFIRQLGDYLSRPELDALSAMKRYFRDLIEELERRQFKGGCLLGNLIGEIGDTN
EICMAALRDAFHRYRDKYTEGLARAQAEGTVRADLSAETMADLLADSMQGALLRMKVERS
VRPLESCLSHLLDDYFKPKND
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaatcggcaacaaacaaatcactcgcgaaaagctattagaccagggcgtcgcc
atgataatggagcgtggctatcatggcacgggtctacaggacttgctatccagcgtcaag
gttccgaagggatcgttttataactattttgccagcaaggatgagttcggggcggaggtg
gttcagcactacatagagccgttcattcggcaactcggcgattacttgagccgaccggag
ctggatgcgctgtccgcgatgaaacgttatttccgtgatttgatcgaggaactggagcgg
cggcagttcaagggaggctgtttgttgggcaacctgatcggtgagatcggagacaccaac
gagatctgcatggcggctctccgagacgcttttcaccgctacagggacaagtacacggaa
ggtttggctcgcgcccaggcggaaggaacggtacgcgccgacttgtctgccgagactatg
gcggatttgctcgctgacagtatgcaaggagccttattgcggatgaaagtcgagcgatcg
gtacgaccgcttgagagttgcttgagccatttgctcgatgattatttcaagccgaagaat
gattga
DBGET
integrated database retrieval system
