Methylocaldum szegediense: MSZNOR_1716
Help
Entry
MSZNOR_1716 CDS
T09668
Symbol
rsmB
Name
(GenBank) 16S rRNA m(5)C967 methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msze03009
]
MSZNOR_1716 (rsmB)
Enzymes [BR:
msze01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
MSZNOR_1716 (rsmB)
Ribosome biogenesis [BR:
msze03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MSZNOR_1716 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Methyltransf_31
Methyltransf_12
MTS
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CAI8807753
UniProt:
A0ABM9I0J2
LinkDB
All DBs
Position
MSZNORmain:complement(1643584..1644876)
Genome browser
AA seq
430 aa
AA seq
DB search
MELNSRALAADVLVQVVGERKTLNQALESTLPKIPRENDRAFVQALCYGVMRWYWRLDYL
VALLTRKPVKDLDIRMLAMLGLYQLKYMRVKPYAAVTETVSAARRKSWAKPFLNGILRSY
LREQATLEARSAEREAIAEAHPEWLVSALQQDWPDRYAEILRQNNLAPPMVVRVNCRTIT
RAAYLDQLARAGISAYASPIGDTAVVLESPVPVENLPGFAKGWVSVQDAAAQLAAPLLEL
ESGLRVLDVCAAPGGKLMHILEACPDLKEVVAVDVSPERVVRIHDNLARAGLTAKVLTAD
ATNPSAWWDGRAFDRILLDAPCSATGVIRRHPDIKVLRTPDDLVGLQDLQRRILDAVWPL
LAPGGRLLYVTCSVLRQENEARIAEFLKTHSDALDVPIKATWGEAVSHGRQILTGDQGMD
GFYYARIAKI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaattcacgtgcactcgcggccgatgtgctcgttcaggttgtcggagaacgg
aaaacccttaaccaggcgctcgaatccaccctgcccaagattcctcgggaaaacgaccgt
gcgtttgtacaagcgctatgctacggcgtcatgcgctggtactggcggctggattatctg
gtcgcgctgctgactcgaaagccagtcaaggatctcgacatccggatgctggcgatgctc
ggtctgtatcagctgaagtacatgcgggtgaagccctacgctgcggtgaccgagacggta
tcggcggcaagacgaaaatcgtgggcgaagccgtttctgaacgggattttgcgtagttat
ctgcgggaacaagcgacgctggaagcccggtcagcggaaagggaggcgatcgcggaagct
catccggaatggttggtttctgcgttacagcaggactggccggaccgttatgcagagatt
ctgcggcaaaacaatctggcaccacccatggttgtgcgggtgaactgccggacgatcacg
cgggctgcctatctggatcaattggcccgggcaggcatttcggcctatgcttctccgata
ggcgatacggccgtggttttggaaagcccggtgccggtcgagaatctgccgggtttcgcg
aaaggttgggtatctgtgcaggatgctgccgctcaattagctgcaccgttgctggagctg
gagtccggtttgcgtgtgctcgacgtttgtgcggctccgggcggcaaattgatgcatatt
ctcgaagcttgtcccgatttgaaagaagtcgtcgcggtcgacgtctctccggagcgggtc
gtgaggattcacgacaacctcgcgcgcgccggtctgactgccaaagtgctaactgccgat
gcgacaaatcctagcgcatggtgggacggtcgggccttcgatcggattttgttggatgcg
ccctgttccgccaccggagtgatacgccgccatccggatatcaaggtattgcgtacgccc
gacgaccttgtcggattgcaagacctgcagcggcgaattttggatgccgtctggccgctg
ttggcgcccggcggaagactgctttacgtgacgtgttccgttttacgtcaggaaaatgaa
gcgagaatcgccgagtttcttaagacccactctgatgcgttggatgtgccgatcaaggcg
acgtggggggaggccgtcagccatggccgtcagatattgaccggagaccaggggatggac
ggtttttattatgctcgtatagcgaaaatctga
DBGET
integrated database retrieval system
