Methylocaldum szegediense: MSZNOR_1859
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Entry
MSZNOR_1859 CDS
T09668
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthetase subunit beta
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00220
Arginine biosynthesis
msze00240
Pyrimidine metabolism
msze00250
Alanine, aspartate and glutamate metabolism
msze01100
Metabolic pathways
msze01110
Biosynthesis of secondary metabolites
msze01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
MSZNOR_1859 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MSZNOR_1859 (carB)
00220 Arginine biosynthesis
MSZNOR_1859 (carB)
Enzymes [BR:
msze01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
MSZNOR_1859 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Epimerase
Motif
Other DBs
NCBI-ProteinID:
CAI8815543
UniProt:
A0ABN8X687
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All DBs
Position
MSZNORmain:complement(1774417..1777641)
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AA seq
1074 aa
AA seq
DB search
MPKRTDIQSILLLGAGPIVIGQACEFDYSGAQACKALKEEGYRVILVNSNPATIMTDPEM
ADATYIEPIDWQTVAKIIEKERPDALLPTMGGQTALNCALDLDRNGILEKFGVQMIGASK
EAIDKAEDREKFKEAMTRIGLSSARSGVAHSLEEALACLDEIGFPAIIRPSFTLGGSGGG
IAYNRQEFVEICERGLELSPTHELLIEESVLGWKEFEMEVVRDRKDNCIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRDAAIAVLREIGVDTGGSNVQFAINPKDGRMIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPTIDYVVTKVP
RFAFEKFPQADDRLTTQMKSVGEAMAIGRTFQESLQKALRSLETGVDGLVEKLDVSAEEA
GNVLLRELRHPGPERIFYIADAFRAGWTLDEVHTHSRVDPWFLAQIEDLVREEMGLAKRT
LATLSPEELFALKRKGFSDSRLATLLGSAESEVRAVRHKHGIRPVYKRIDSCAAEFATAT
AYLYSTYEEECEANPTERKKIIVLGGGPNRIGQGIEFDYCCVHAAMALREDGYETIMINC
NPETVSTDFDTSDRLYFEPLTLEDVLEIIHLEKPYGVIVQYGGQTPLKLARALEAADAPI
IGTSPDSIDLAEDRERFQKLIERLNLKQPPNRTARSLDEAMRCANEIGYPLVVRPSYVLG
GRAMEIVFNDEELARYMREAVSVSNESPVLLDRFLDDAIEMDVDAICDGKRVLIGGLMQH
IEQAGVHSGDSACSIPPYELSAELQERVRQQVRQLAEALGVVGLMNTQFAIKGEEIFILE
VNPRASRTVPFVSKATGYPLAKIAARCMVGKSLDEQGIFEERVPKYYSVKEAVFPFIKFP
GVDPLLGPEMKSTGEVMGVGATFGEAYAKAQRAASVKLARSGNVLISVRESDKPKVIPIA
RDLLAKGFRLVATRGSARVLEEAGIPCVTVNKVYEGRPHIVDMIKNDELQFIINTTEGKK
AIADSFTIRRQALQQQVTYTTTISGARATCAALNELDAGDVNRLQDLHRELSKV
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagaaccgacattcagtccatcctgttgctcggtgccggccctatcgtcatc
gggcaggcctgcgagttcgattactccggcgcacaggcgtgcaaagcattaaaggaagaa
ggctaccgggtgatcctggtcaattccaaccccgccaccatcatgaccgatccggagatg
gccgatgcgacctacatcgagcctattgactggcagaccgttgccaagatcatcgagaag
gaacgtccggatgcactgttgcctaccatgggcggacagaccgcgctgaactgcgcactc
gacctggaccgtaacgggatcttggaaaaattcggcgtgcagatgatcggtgcctccaag
gaggcaatcgacaaagctgaggaccgggaaaagttcaaagaggcgatgaccagaatcggt
cttagctcggcccgttccggcgtcgcgcatagtctggaagaagccttggcgtgtctcgac
gagatcggctttcccgccatcatccgtccttcgttcacgctgggcgggtcgggcggaggc
atcgcctacaaccgacaggaattcgtcgagatttgcgaacggggtttggaactttcgccc
actcacgagcttctcatcgaagaatcggtgctgggctggaaagagttcgagatggaagtg
gtgcgcgatcgcaaggacaactgcatcatcatctgctccatcgagaatctggaccccatg
ggggtacataccggcgactccatcaccgtcgccccggcgcagacactgacggacaaggaa
taccagatcatgcgcgacgccgccatcgcggtgttgcgcgagatcggagtcgacaccggc
gggtccaatgtacagttcgcgattaaccccaaggacgggcgcatgatcgtcatcgagatg
aatccccgcgtgagccgctcgtcggccctggcatccaaggcgaccggatttccgattgcc
aaggtcgccgccaagctggccgtcggctacacgctggacgaactcaagaacgagatcact
ggaggcgcgacgccggcgtctttcgaaccgacgatcgactacgtcgtcaccaaggtgccc
cggtttgcgttcgaaaagtttccgcaggctgacgatcgcctgacgactcaaatgaaatcg
gtcggcgaggccatggctataggccgcactttccaggaatccctgcaaaaagccctgcgc
agcctggaaaccggtgtggacggtctggtcgaaaagctcgacgtttccgccgaagaagcc
ggcaatgttttgcttcgggagctccgtcatccggggcccgagcgtattttctacatcgcc
gacgctttccgggcaggctggacgttagacgaggtacacactcatagccgggtcgatccg
tggttcctggcgcagatcgaggatctggtgcgcgaggagatggggctcgcaaagcgtacc
ctcgccacgctgtctccggaagaactgtttgccttgaagcgcaaaggattttccgactcg
cgtctcgcgacgctgttgggcagcgccgagtcggaagtacgagcggtccgtcacaagcat
ggcatccgtccggtttataagcgcatcgattcctgtgcggcggagtttgccacggcaacg
gcctacctttattccacttatgaggaagaatgcgaggcgaatccgaccgagcggaagaaa
atcattgttttgggcggcggacccaatcgcatcggccaaggtatcgagttcgactattgc
tgcgtgcacgccgcgatggcgctgcgggaagatggttatgagaccatcatgatcaactgc
aaccccgaaacggtgtccaccgatttcgacacgtccgaccggctctatttcgaaccgctc
acactggaggacgtgctggagatcattcatctggaaaaaccctatggcgtgatcgtgcag
tacggcgggcagacgccgctgaagcttgcgagggcgctggaagcggcggacgcgcccatt
atcggcacctcgcccgattccatcgacctggcggaagaccgcgagcgttttcagaagctt
atcgagcgcttgaatctcaaacagccgcccaaccgaaccgcccgctcgctggatgaagcc
atgcgctgcgcgaacgaaatcggctatccactagtcgttcggccgtcttatgtattgggc
ggaagggccatggaaatcgtgttcaacgacgaggagctcgctcgctacatgcgcgaggca
gtgagcgtttccaacgaatcgccggtgctgttggaccggtttttggacgacgccatcgag
atggatgtcgacgccatctgcgacggcaagcgcgtcctgatcggcgggctgatgcaacac
atcgagcaggcaggcgtgcactccggcgactcggcgtgctcgattccgccctatgagttg
agtgccgagcttcaagagcgggtgcggcaacaggtccgccagcttgctgaggcgctcggc
gtggtagggctcatgaatacccaatttgccatcaagggagaagagatttttattctggaa
gtcaatccccgcgcctcgcgcaccgttccgttcgtgtccaaggcgaccggatatccgttg
gccaagatcgcggcgcgttgcatggtagggaaaagtctggacgaacagggtatcttcgag
gaacgcgttccgaaatattactcggtcaaagaggcggtgttcccgttcataaagttcccc
ggagtcgatccgttactcggtccggagatgaagtcaacgggcgaagtgatgggagtgggg
gccacgttcggcgaagcatacgccaaagcccagcgtgccgccagcgtcaagctggcgcgt
tccggcaatgtgctgatcagcgtccgtgagagcgataaaccgaaggtcattccgatagct
cgagatcttttggccaaaggcttccgattggtggctacgcgcggatcggcaagggtgctt
gaagaagccggcataccctgtgttactgtaaataaggtatatgaaggcagaccgcatatc
gtggacatgatcaagaatgacgaactgcagttcatcatcaacacaaccgaaggtaagaaa
gccattgccgattcgttcaccattcggcgccaggcactgcaacagcaggttacctacacg
accaccatttccggtgcccgcgcaacctgtgctgccctgaacgaactggatgcaggcgac
gtcaatcgtttacaggacttacaccgggaactcagcaaagtctga
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