Methylocaldum szegediense: MSZNOR_2088
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Entry
MSZNOR_2088 CDS
T09668
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msze01011
]
MSZNOR_2088
Enzymes [BR:
msze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
MSZNOR_2088
Peptidoglycan biosynthesis and degradation proteins [BR:
msze01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
MSZNOR_2088
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
SLT_2
Motif
Other DBs
NCBI-ProteinID:
CAI8827889
LinkDB
All DBs
Position
MSZNORmain:1999940..2001568
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AA seq
542 aa
AA seq
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MEIDRMKPGITFCTWMTFAVLAVFFAGSADADNVPLGYRYPDEAPKQVDSPFAEPPGLQD
AVQFWRQVFGVWRLNQFALHDNVHLGVVYDVIKLPDVDGNGLTPEQKSSVEWYVNALKDE
LQELEERVRFGAPLSDSQQRLFDLLVAHAGEGAIYGASQRVRSQRGLRERFLRGLEISGR
YDRLFRRIFREAHLPEDLALLPHVESSFVNHAQSTAGAVGMWQFMRSTARRCLHLSRAVD
ERFDPVFAARGAARYLAHAYDVLGDWGLAITSYNHGIGGMVRASREFGPDLGRIVRYYQG
PAFGFASRNFYAEFLAVRSIIQNLPDYFPEGVSFEPPLRHDLLRLTRPVSVTHLATAHGV
ERDTLAALNPAWTTTAIKGHTLLPAGIDVWLPRGTLASASGFSDYGEPVLMAGGDLLPDQ
TPQASETDGRIITAGLSDFTEESVSVRPRLLVAPAPVPPSDIVRTSAHRKTAAKTANSGL
KAKSKQSPKQAIRIHTVRRGESPRVIAAKYGVGLRKLLTINAITKRTVLRPGQKLRIPLS
SS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgatcgcatgaaaccgggaatcacattttgtacttggatgacattcgccgtc
ctggcggtgttttttgccgggtccgccgacgcagataacgttcccttaggttatcgttat
ccggatgaagcgccgaaacaggttgactccccgtttgccgaaccgccgggtttgcaggat
gcggtgcaattctggcgtcaggtcttcggggtgtggcgtctgaatcaatttgcgctccac
gacaatgttcatttgggagtcgtttacgacgtcatcaagcttccggacgtcgacggcaac
ggtttgacgccggagcaaaaatcgtccgtggaatggtacgtcaatgcgctcaaggatgag
cttcaggagttggaggagcgagtgcgcttcggcgctccgttgagcgattcccagcagcgg
ctgtttgatcttctggttgcccatgccggcgaaggcgcgatttatggagcgagccagcgg
gtgcgcagccagcgcggtctccgggagcgttttctaaggggactcgaaatcagcggccgt
tatgaccgcctattccgccggatattccgcgaggcccatctgcccgaagacctcgcttta
cttccccacgtcgaatcatccttcgtgaaccatgcccagtcgactgctggagccgtcggc
atgtggcagttcatgcgctcgacggcccgccgatgcctgcatctgagccgggctgtcgac
gaacgttttgacccggtgttcgccgcacgtggcgccgctcgctacctcgctcacgcctat
gacgtactcggcgactggggcttggccatcacctcgtacaatcacggcataggcggtatg
gtacgggcgagccgggaattcggcccggatctcggccgaatcgtccgttattatcaggga
ccggctttcggtttcgcgtcgcggaatttttatgccgaattcctcgccgtacggtcgatc
atccagaacttgccggactattttccggaaggcgtgtccttcgaaccgccactcagacac
gatctcctccgtctgacccgccccgtgtctgtcacccatctggccacagctcacggggtg
gaacgggacacgttggccgcgctcaacccggcgtggacaacgactgcgatcaaaggtcac
actttgcttcccgcgggcattgacgtttggctaccgcgcgggaccttagcaagcgcctcg
ggattctcagattatggggaaccggttctgatggccggcggtgacctactgccagaccag
acgccacaagcgagcgagaccgatggacgcatcatcacggccgggttgagtgatttcacg
gaagagtcggtgagcgtacgaccacgtttgctggtcgccccggcaccagtgccaccctcg
gatatcgtaagaacgtccgcgcacagaaaaaccgcggcaaaaacagccaattccggactg
aaagcaaaatccaaacagtcgccgaaacaagcaattcgaatacacaccgttcgccggggc
gaatcgccgcgtgtgatcgctgcaaagtacggcgttggactccgtaaactgctgacgatc
aatgccatcaccaagcgaacggtgctccgcccagggcaaaagctccggattccgctcagt
tccagctga
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