Methylocaldum szegediense: MSZNOR_2128
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Entry
MSZNOR_2128 CDS
T09668
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msze
Methylocaldum szegediense
Pathway
msze03030
DNA replication
msze03430
Mismatch repair
msze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSZNOR_2128 (dnaQ)
03430 Mismatch repair
MSZNOR_2128 (dnaQ)
03440 Homologous recombination
MSZNOR_2128 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msze03032
]
MSZNOR_2128 (dnaQ)
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_2128 (dnaQ)
Enzymes [BR:
msze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSZNOR_2128 (dnaQ)
DNA replication proteins [BR:
msze03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSZNOR_2128 (dnaQ)
DNA repair and recombination proteins [BR:
msze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSZNOR_2128 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAI8830135
UniProt:
A0ABN8X286
LinkDB
All DBs
Position
MSZNORmain:2039884..2040597
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AA seq
237 aa
AA seq
DB search
MRQVVLDTETTGLDPAEGHRIIEIGCVELVNRRLTGNRFHVYLNPERDIDPGAVEVHGLS
SEFLADKPRFADVAEDFLAYIKGAELIIHNAPFDIGFIDHELQRLPGGLASVTEYCTVLD
TLVLARKKHPGQRNNLDALCKRYNIDNRHRELHGALLDAEILAEVYLAMTGGQTLLVLEP
ESIEEGSRKSRQTSKIAVSASRPPLRIIRCNETEFQAHLSSLETIRKASNGKCLWKA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaggtcgtacttgataccgaaaccacggggctcgacccggcggaaggacatcgc
atcatcgaaatcggctgcgtggaactcgtcaatcgtcgcctgacgggaaatcgctttcac
gtctaccttaaccccgagcgagacatcgaccccggagccgtcgaggtccatgggttaagc
tccgaatttttggccgataaacctcgttttgctgatgttgccgaggactttctggcgtat
atcaagggcgctgaactcattattcacaatgccccgttcgatattggatttatcgaccac
gaattacaacgactacctggcggtcttgccagcgtgacggagtattgcaccgttctcgac
acactggtgctcgccagaaaaaaacaccccggacagcgcaacaacctggatgcattgtgc
aagcggtacaatatagacaatcggcaccgagaactgcacggagcgctgcttgatgccgag
atcctagccgaagtctacctagcgatgaccggcggccagacattgctggtattggaaccg
gagtcgatagaagagggttcccgcaaatcgcgacaaacatcgaaaattgccgtatcagcg
agtcgcccgccgcttaggatcatccgttgcaacgaaacggaatttcaggcccacctctca
agcctcgaaaccatccgcaaggcaagcaacggaaaatgtctttggaaagcctaa
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