Methylocaldum szegediense: MSZNOR_2457
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Entry
MSZNOR_2457 CDS
T09668
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
msze
Methylocaldum szegediense
Pathway
msze03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSZNOR_2457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_2457
Enzymes [BR:
msze01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSZNOR_2457
DNA repair and recombination proteins [BR:
msze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSZNOR_2457
Prokaryotic type
MSZNOR_2457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAI8848173
UniProt:
A0ABN8X8E7
LinkDB
All DBs
Position
MSZNORmain:complement(2340539..2341174)
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AA seq
211 aa
AA seq
DB search
MDERLRSLILHQEELKNCARCPEMIGPVVTGRAVLSPVVLIGQAPGSKEGQLGRPFAWTA
GKTLFKWFADIGVSEHVFRQRVYMAAVCRCFPGKNPKGGDRVPTLEEIGRCAEWLNAELR
LIRPKLVIPVGKLAIRQILAVDRLDQVIGLRHRFCRDGLEADVIPLPHPSGASTWHRREP
GKTLLHDALRLIREHPAWEEICRGPDGGTLR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcgtttgcgctcattgatcctccatcaggaggagttgaagaattgcgcgcgt
tgccctgagatgatcggtcctgtggtcacggggcgcgctgtgttgtcgccggtagtcttg
attggccaggcgccaggctccaaggaagggcaactgggtagaccgttcgcgtggaccgcc
ggaaaaacgctcttcaaatggttcgcggatataggcgtgtcggaacacgtgtttcgccag
cgggtctacatggcagccgtatgccgttgctttcccggtaagaacccgaagggcggtgac
cgggttccgaccctcgaggaaatcggtcgttgcgccgagtggctgaacgccgaacttcgt
ctcataaggcccaagttggtcatacccgtgggtaagctcgcgattcgccaaattttggcc
gtggacagattagaccaggtgatcgggcttcggcacagattttgtcgagacggcttggaa
gctgacgtgatacctttgcctcacccatccggcgcctcgacctggcaccgccgggaaccc
ggcaagaccctgctgcatgacgccctgaggctgatccgtgagcatcccgcttgggaggag
atatgccggggtccagatggcgggactttgcgatag
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