Methylocaldum szegediense: MSZNOR_2614
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Entry
MSZNOR_2614 CDS
T09668
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
msze
Methylocaldum szegediense
Pathway
msze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MSZNOR_2614 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_2614 (recD)
Enzymes [BR:
msze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MSZNOR_2614 (recD)
DNA repair and recombination proteins [BR:
msze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSZNOR_2614 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_22
UvrD_C
AAA_16
nSTAND3
HVO_0513_N
PhoH
Flavi_DEAD
AAA
AAA_28
AAA_24
AAA_5
DEAD
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAI8856624
UniProt:
A0ABN8X867
LinkDB
All DBs
Position
MSZNORmain:2515631..2517556
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AA seq
641 aa
AA seq
DB search
MMDCTHRSSSPNPHPEIMKHEALAAPTSLSAPPSPASKSTMAAPALVKLSPLGKQFAAYL
SRLDHTPEEAVRWAAQLAYQAVADGQVCLRLDDYAGSEAVVEDGATVVLPTLDEWLAALR
KSRLIGSPGSFAPLVLDANNRLYLTRYWRYEKTVADSLKALAESPCPEIDEGKLRTELDL
LFAHNTEVPDRQKLAAAVAVLRRFCVISGGPGTGKTSTVVRILAALQSQAGDKPLRIALS
APTGKAAARLQEAIREQKARLPISQAVRDTLPETASTLHRLLGARPDSVYFRHNRKNPLP
FDVLVVDEASMIDLALMAKLVDALPKNARLIMLGDKDQLASVEPGAVFGDLCRSFGYSPA
FRERLYAASGVETPSGDLFTPALSDCIALLTHSHRFGSESGIGQLARLINAGRAKDAVDL
LSSGRHPEIHWEPARRHSPADLVARMENGYRAFFAAVDSGAEVEAVLRAFGRFRVLTAHR
EGDSGADGINRLFEERLHEVRRLRRGTRWYPGRPVIVTRNDYDLRIFNGDIGITLETAAG
LRVFFEDADGHIRCFAPARLPEHESVYAMTVHKSQGSEFDEVLLALPDVESPVLDRPLIY
TAITRARHRVEILGSRKILEEAIKRVPDRSSGLRERLWRHI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgatggactgcacccatcgatcaagctcgccgaatccgcatccagagatcatgaaacac
gaagccctcgccgcacccacgagtttatcggcgcccccgtcgccggcatccaaatcgacc
atggccgctccggcgctcgtcaagctgtcgcctctcggaaaacagtttgccgcctacctg
agccggctggaccataccccggaagaggcggtccgctgggctgcgcaactcgcctatcag
gcggtagcagacggtcaggtctgtctccgtctcgacgattacgcgggttccgaagcggtc
gtcgaggacggcgccaccgtcgttctgcccaccctggacgagtggttggctgcgctccga
aaatcgagattgatcggatcacctggcagcttcgcgccgctcgtgctcgacgccaacaac
cgtctttacctgacgcgttattggcgttatgagaagactgtggccgatagcctcaaggca
ctcgcggaaagtccctgtccggaaatcgatgaaggcaagcttcggaccgagctggacctc
cttttcgcccataacaccgaagtgcctgaccggcaaaagttggcggcggcggtggccgta
ctcaggcgattctgtgtcatttccggcggtcccggaaccgggaagacctcgaccgtggtt
cgcatactcgccgctctccaatcccaggccggagataagcccttgcgcatagcgttgagt
gcgcccaccggcaaggctgcagcacggctgcaggaagccattcgcgaacagaaggcgagg
ctgccgatatcgcaagccgtgcgcgacacacttcccgaaaccgcttctaccctacaccgc
ctgctcggcgcgagacccgattccgtttattttcgccacaaccggaagaatccgctgccg
ttcgacgtgctagtggtcgatgaggcctcgatgatcgacctggcgctgatggccaagctg
gtcgacgccctgccgaaaaacgcccggctgatcatgctgggtgacaaggatcagttggcg
tcggtagagcccggcgcagtattcggcgacctttgtcggtccttcgggtacagcccggcg
tttcgcgaacggctctatgcagcctcgggggtcgagactccgtcaggcgatctgttcaca
ccggccctctccgactgcatcgctctgctcactcacagccatcgctttggttcggaaagc
ggcatcggccaattggcgcggctgattaacgccgggcgcgcgaaagacgcggtggattta
ctctcgagtggccgccatcccgaaattcactgggaaccggcgcggcggcacagcccggcg
gatttggtcgctagaatggaaaacggctatcgggcgttcttcgcggccgtggactcgggc
gccgaagtggaggcagtcctccgggccttcggccgttttcgggtgctcaccgcgcaccga
gaaggcgacagcggggctgatgggattaaccggctgttcgaagaacggcttcacgaggta
cggcggttgcgccgtggcacgcggtggtatccggggcgtccggttatcgtcacacgtaac
gattacgacctccggatcttcaacggcgatatcggcattacgctggagacggcagccgga
ctcagggtttttttcgaggacgccgacggccatatccggtgcttcgcaccagctcggctg
cccgaacacgaaagtgtatacgccatgaccgtacacaagagccaagggtctgagttcgac
gaggtcttgctggcgctgccggacgtcgaaagcccggtgctggaccgcccgctgatctac
accgccatcacccgagcacggcaccgagtggaaattctaggctcccggaagattctggaa
gaagccatcaagcgtgttccggatcgatcgtccgggcttcgggagcggctctggaggcat
atctaa
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