Methylocaldum szegediense: MSZNOR_2806
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Entry
MSZNOR_2806 CDS
T09668
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00550
Peptidoglycan biosynthesis
msze01100
Metabolic pathways
msze01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MSZNOR_2806 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MSZNOR_2806 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msze01011
]
MSZNOR_2806 (mrdA)
Enzymes [BR:
msze01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MSZNOR_2806 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
msze01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MSZNOR_2806 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
CAI8866934
LinkDB
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Position
MSZNORmain:2721986..2723830
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AA seq
614 aa
AA seq
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MSRPFDLNEKFYENRLFLNRIAASVLFILLATTGLVIRLIYLQVMGHEHYSTLSRDNQVK
ISPLAPSRGLIFDRNGEVLADNTATYSLEIIPERVPDLEATLSELQKLLNLSDDELNRFR
LQKSQRKSFESVPLRLELTEEEIARFAVKMPYFPGVEIRTRFMRSYPYGHLTSHVVGYVA
RINESELRSLDPAQYRGTYHIGKSGVEKAYESVLHGKTGYEEYETNVQGRPIQILNTTDP
VAGADLYLSLDIRLQKTAFDALGEFNGAVAAIDPATGKVLVLVSKPGFDPNPFIHGISKK
DYDALQNAPDRPLYDRALRGVYPPGSTVKPFVSLAGLKILNISPARRVLCPGYYRLPNAE
HKYRDWRKQGHGSVDLKLAITQSCDVYFYDLAHHIGIDPLHDFMQLFGFGERTGIDLVGE
KPGLFPSKEWKKKKRKQVWYPGETIIAGIGQGYVQVTPIQLARATAILANRGRNVEPRVV
DTIKAPYEIESLYPKSSDEIVADLKPEHWRTVIDAMVDVVHSARGTAKVIAPGLSYTVAG
KTGTAQVFTVRQDQDYKKMKIAKTLRDHAWFIAFAPVEAPRIAVAVLAENGGHGGSVAAP
IARAVMDQYLLENP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcctttcgacctcaacgagaagttttacgagaaccggctgtttctcaaccgc
attgccgccagcgtactgttcatactactggccacaacagggctcgtcatccgcctgatc
tatttgcaggttatgggacacgagcactactccactttgtcgcgagacaaccaggtcaag
atctctcctttggcgccttcccgcgggctgattttcgaccgaaacggcgaagttctagcc
gacaatacggcgacttatagcctggaaatcattcccgaacgggttccggatctggaagca
accttatcggagctccaaaagctgctgaatctaagcgacgatgaactcaaccgtttcaga
cttcaaaaaagccagagaaaaagcttcgagagcgtacctctacgcctggagttgacagaa
gaagaaatcgcccgtttcgccgtcaagatgccttattttccgggagttgaaattcggacc
cggttcatgcggagctatccttacggccacttgacgtcccacgtcgtgggttatgtcgcg
cgcattaacgaatccgaactccgatccttggatccggcccaatatcggggaacctaccac
atcggaaaaagcggcgtcgaaaaagcttacgaatccgtcttgcatgggaaaaccggttac
gaggagtatgaaaccaacgtccaagggcgccccattcagatactaaacaccaccgatccc
gtggcgggagccgatctttacctttccttggacattcggctgcaaaaaaccgccttcgat
gccttgggcgagttcaacggagccgtagcggcgatcgaccccgccaccggcaaagtattg
gtcttggtcagcaagccaggcttcgatcccaaccccttcatccacggcatcagcaaaaaa
gattatgacgcccttcaaaacgctccggaccggccactgtacgaccgcgcgctccgcggc
gtctatccgcctggctccacggtcaaacccttcgtgagcctggccggcttgaaaattctc
aatatcagcccagcaagacgagttctttgcccgggctattaccgcctacccaatgcggag
cacaaataccgggactggcgcaagcaaggccatggctctgtagatctcaaattggccatc
actcaatcctgtgacgtgtacttctacgacctcgcccaccatatcggtatagatccgctc
cacgatttcatgcaactcttcggctttggggaacggactggtatcgatctggtcggggaa
aaacctgggttgtttccttcaaaggaatggaagaaaaagaaacgcaagcaggtatggtat
cctggtgaaaccatcatcgcaggcattggacaaggctatgtccaagttacgcctattcag
ctggccagggcgacggcgatactcgccaatcgtggacggaacgtagaaccaagagtcgtg
gacaccataaaagccccgtacgagatcgaaagcctctatcccaaaagcagcgacgagatc
gtcgccgacctcaaaccggagcattggcgcacggtaattgatgccatggtcgatgtcgtc
cacagtgcacgcggcaccgccaaagtaatagccccgggactttcctataccgtcgccggc
aagactggtaccgcacaagtcttcaccgtgcggcaggaccaggactacaagaagatgaag
atcgccaagaccttgcgtgatcatgcgtggttcatagccttcgcaccggtggaagcacca
cgcatcgcggtcgccgtgcttgcggaaaacggtggacacggagggtcagtcgcggctcct
atcgcccgtgccgtaatggaccagtacctgctcgaaaatccatga
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