Methylocaldum szegediense: MSZNOR_3068
Help
Entry
MSZNOR_3068 CDS
T09668
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msze03021
]
MSZNOR_3068 (rpoH)
Transcription machinery [BR:
msze03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MSZNOR_3068 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
GntR
2Fe-2S_thioredx
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CAI8881597
LinkDB
All DBs
Position
MSZNORmain:complement(2961457..2962311)
Genome browser
AA seq
284 aa
AA seq
DB search
MSNALTLPVNLSLGSIEDYVAAVNALPRYSAEEERALALRFREHNDLEAARQLVLGNLRF
VVHIARGYLGYGLPLPDLIQEGNIGLMKAVKRYDPAVGVRLVSFAVHWIKAEIHEFIIQN
WRIVKVATTKAQRKLFFNLRKFKNRLGWLSRDEANVLADELGVDVATVYEMENRLNNQDV
AFEASDAESDDREAPAPIHYLQQENADPADLLEANDWGQHKQQQLAAAIEKLDERSRDIV
RSRWLSEEKLTLHDLAMRYQVSAERIRQLENTAMKKLRNCLLEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcattaacgcttccggttaatctctcgctcggctccatcgaagactatgtc
gcggccgtaaacgcgctgccgcgctatagtgccgaggaagaacgtgcattggccttacgc
tttcgcgagcataacgatctcgaggcggcacgacagctagtactcggcaatctacgcttc
gttgtccacattgcgcggggttatctcggctacggtttgccgctccccgatttgatccag
gaaggaaacatcggcctcatgaaagccgtgaaacgctatgacccggcggtcggcgtccgg
ctggtttcctttgcggtccattggatcaaggcggaaattcatgagttcattattcaaaac
tggcgcatcgttaaagtcgcgaccactaaagctcagcgcaaattgttcttcaatttgcgc
aagttcaagaaccgcttgggatggttgagccgtgacgaggctaatgtccttgccgacgaa
ctgggcgtcgatgtcgcgacggtttatgaaatggaaaatcgtctaaacaaccaggatgtt
gccttcgaggccagcgatgccgagagcgatgatcgagaagcgccagcccccattcattac
cttcagcaggaaaatgccgatccggcggatttgcttgaagctaacgattggggtcagcac
aagcagcagcaattggcggccgccatcgagaagctggacgaacgcagccgggatatcgtc
aggagtcgttggctgagcgaggaaaaactgacccttcacgatctcgcaatgcgctaccaa
gtgtctgctgaaaggattcgccagttagaaaataccgccatgaaaaagctgcgaaattgt
ttattggaagcttga
DBGET
integrated database retrieval system
