Methylocaldum szegediense: MSZNOR_3162
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Entry
MSZNOR_3162 CDS
T09668
Name
(GenBank) Ca-activated chloride channel homolog
KO
K07114
Ca-activated chloride channel homolog
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msze02000
]
MSZNOR_3162
Transporters [BR:
msze02000
]
Other transporters
Pores ion channels [TC:
1
]
MSZNOR_3162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
VWA_2
TPR_2
TPR_11
TPR_19
TPR_8
TPR_16
TPR_7
TPR_14
TPR_17
ANAPC3
TPR_12
TPR_9
TPR_6
TPR_Slam
TPR_10
SRP_TPR_like
DUF2683
Fis1_TPR_C
TPR_4
Motif
Other DBs
NCBI-ProteinID:
CAI8886674
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All DBs
Position
MSZNORmain:complement(3054405..3056264)
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AA seq
619 aa
AA seq
DB search
MTDFHFLRPWWLLAVVPLAALLWGLYQRRRNVGDWKDVCDEALLPHVVVGGHGRAGLWPL
FIAALSGLIAILALAGPVWERLPAPAFRNIAAVVIVLDLSSAMDAADLKPSRLERARYKI
ADILRARKDGQTALVVYAGDAFTVTPLTDDAATIAAQLSALSTDLMPIQGERIDLGLTSA
VRLLKQAGLRNGDILLISAGGGVAAAEDEARQAKAEGYRVSVLGAGTEEGAPVPLPKGGF
LKDESGSIVVPRLDASGLRRLAEAGGGIYRELTADSGDLDALLGFFERHATADTLGEKTL
NVDQWKEQGVWLLLALLPLAALSFRRGWLAAWLLMLTIPFPNDARALDWQDLWQTPDQQA
QRAFKNENYDEAAKTFKNTEWKAAAHYKAGRYEDAAKILEGTNSVIGHYNRGNALARQGR
YQEAIQAYQKALELDPEHADARYNKELIEKALEQQKQQREEQQQSGKDSESQSESSQSQQ
ASSDGEDGQDHERESRDQAGGNDNSRQQNTGSESEADASDRSDTESSTESEAHGRPETND
EKASGQDSDRVAPDHAEDRQPPGSEEKEIAADTRTTDETRQAEEQWLRRIPDDPGGLLKR
KFYYQYLQRQRTQGAEPRP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattttcacttcctacgcccctggtggctgctggcggttgttccgctcgcggct
ctgctttgggggctctaccagcggcgccggaatgtcggcgactggaaggatgtctgcgac
gaagcgctgttgccccatgtcgtcgtcggcgggcacggccgcgccggcctctggccattg
ttcatcgccgctttgagcggcctcatcgccatcctggcgttagcgggaccggtttgggaa
aggctacccgctccggcgttccgcaatatcgccgccgtagtcatcgtcctcgatctttca
tcggccatggatgccgccgatctcaaaccgagccgcttggaacgcgcccgctataagatc
gccgacatcctgagagcacgtaaggacggccaaaccgcgcttgtcgtctatgccggcgac
gcgttcaccgtcaccccgctgaccgacgatgcggccaccatagccgcacaactttccgcc
cttagcaccgacttgatgccgatccagggcgaacgcatcgacttgggcttgacatcagcc
gtccgactcctgaaacaggccggcttgaggaacggcgacatcctgctgatttctgccggc
ggcggcgtagccgcagccgaggacgaagcacgccaggcaaaagcggaaggctaccgagtt
tccgtactaggcgctggtaccgaagaaggtgcgccagtgcctttgcctaagggcgggttc
ttgaaagatgaaagcggaagtatcgtcgttcctcggctcgatgccagcggactacggaga
ctggcggaagcgggcggcggcatctaccgcgagcttaccgccgactccggtgatctcgac
gcgcttcttgggtttttcgaacgacatgccactgccgacacgctgggcgagaaaaccctg
aacgtcgatcaatggaaggagcagggagtttggctgctcttggcgctgctgccgctcgcc
gccttatccttccgacgcggatggctcgccgcctggctgttgatgcttacgatcccgttt
ccgaacgatgcccgagcgctggactggcaggacctgtggcaaacgcccgaccagcaggca
cagcgagccttcaaaaacgagaattacgacgaagccgccaaaacgttcaaaaacaccgaa
tggaaagcagccgcccactacaaggccggacgctacgaagacgccgcgaaaatcctcgag
ggaacgaactcggtaatcggccattacaaccgtggcaacgccttggcccggcagggacgt
taccaggaagctatccaagcttaccagaaagctctggagcttgatcccgagcacgccgac
gcccgctataacaaagagctcatcgaaaaagcattagagcaacagaaacagcagcgggaa
gaacagcaacaaagcggcaaggactccgaatcgcagtccgaatcctcgcaatcacaacag
gcttcgtcggacggcgaagatggccaggaccacgagcgcgaatcgcgcgatcaagcaggc
gggaatgacaactcccggcagcagaacaccggttccgagagcgaagccgatgcgtccgat
cgctcggacaccgagtccagcacggaaagcgaggcgcatggccgacccgaaacgaatgac
gaaaaagcgtccggccaagattctgaccgggtggcaccggatcacgctgaggaccgtcag
cccccaggcagcgaagagaaggaaatcgcagcggacacgcgaacgaccgacgaaacccgg
caggccgaagaacaatggctacggcgcattcccgacgacccgggcggactcttgaaacgc
aagttctattaccaataccttcaacggcaacggactcaaggcgcggaaccgagaccatga
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