Methylocaldum szegediense: MSZNOR_3409
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Entry
MSZNOR_3409 CDS
T09668
Symbol
lptD
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msze02000
]
MSZNOR_3409 (lptD)
Transporters [BR:
msze02000
]
Other transporters
Pores ion channels [TC:
1
]
MSZNOR_3409 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
Motif
Other DBs
NCBI-ProteinID:
CAI8899387
LinkDB
All DBs
Position
MSZNORmain:complement(3300590..3303343)
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AA seq
917 aa
AA seq
DB search
MVSLLHFNRGRSALMLCLGLGPSCLLAAASDWDCQRSKDDSEWVCVTRKSKSETAVTPSD
QPESKAAEPAKEFEPATDSAVARPEVSRPPRTREPAPTAKSELKQGDRPIRPAPPKSVAA
AKPSGWTCRPGETGKEWDCSLVGPDPQGLARVVPEEGETTENWAETTTITQEDEQRFRKL
MALLPADPWARACAGKSESAPMTEFLMTPQDRLARQQQPLEIRSDYAEMVDDEIATFIGS
AELTRADQKLWGDFVTHNTVSDTLNARGNVIYQEKGLTFSSDTGFLELDTNRGVLRNAQF
ILGTIPARGTSRLTHFDSNTLSRYEKFTYTTCPPGDTDWMLHARNVKINKETGRGSAKHA
WLEFKGVPLLYTPYMTFPVDDRRQSGFLTPSFSSTRVRGFDLTIPYYFNLAPNFDATFTP
RILTKRGYLLRGEFRYLTEMTRGRLFAEYMPHDEVRGDSRGQFGILNDTRFTDNLFAHVD
ANYVSDDRYLNELGNQLNIVDRRHIRSWGQLTYVGTNFNVTTLADYYQTIDPTIPPAARP
YYRLPRVTFNYARGIGNTGFVFSGSSELANFSHTGGRVTGQRLNVMPRISYPYQKAGGFI
IPSLSLQYTQYWLQDQPPGLSDSPSRTAPIFSLDSGLFFEREFQMGDTPLLQTLEPRLFY
LYIPDRKQDDLPVFDTGEYDFSFYQLFRENRFTGHDRLGDANQITLALTSRMIDQSSGME
RLRASVGEIFYFDDRDVSLPNLPQRPGNKSNLVGEVYSRLTNTWSIRTGGQWNPEDGTID
RGQIALQYDDRDNHLFNVAYRFRRDQNLDLVRLDLTDVSFRLPFAEGWNAIGRWQYSLLD
QVTLESFLGIERETCCWRLSIIGRHYINDIRTSEDGGNVANNEIFVQLELKGLTRFGRQI
DRFLERSISGYRLEGDE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctgcttcatttcaaccgtggccgatcggcgttgatgttatgcctaggactg
gggccctcttgcctgctggcggccgcgtccgactgggattgccagcgtagcaaggatgac
agcgaatgggtctgcgtgacccggaaatccaaatccgagaccgccgttacaccatcggac
cagccggagagcaaagcggcggaacccgcgaaagagttcgagccggcgaccgactccgcc
gtcgcgaggccagaggtatctcgtccgccaagaacccgagaacccgcgccgacggccaag
tccgagttgaaacagggggaccgtccaatcagaccggcaccgcctaagtcagtcgccgca
gccaaaccatctggttggacctgccgccccggcgaaaccggaaaagagtgggattgctct
ttggtcggaccagacccccaaggtcttgcgcgcgtagtgccggaagaaggcgaaacgacc
gaaaactgggcggaaacgacgacgattacccaggaagacgaacaacgcttccgtaaattg
atggcgctgcttccggccgatccttgggcaagagcctgcgcaggcaaatcggagtcagcg
ccgatgaccgaatttctgatgactccgcaagacaggctcgcgcgccagcagcagcctttg
gaaattcgatccgattatgccgaaatggtggacgatgaaatcgcgacctttatcggatca
gccgaactgacacgggcagatcaaaaactatggggggatttcgtcacccacaacacggtc
tcagacaccctgaacgcccgaggcaacgtgatttatcaggagaaaggactcaccttctcc
agcgataccggttttctggagctcgatacgaatcgcggtgtcctgcgtaacgcgcagttt
attctaggaacaattccggcgcggggtacctcgcgcttgacgcatttcgacagtaacacc
ttgtctcgctacgagaaattcacttacaccacttgtccgcccggagacacggactggatg
ctccacgcccgtaacgtcaaaatcaacaaagaaaccggacgcggttcagcaaaacatgcc
tggctggaattcaaaggcgtaccattactttacaccccttacatgacctttccggtggac
gatcgtaggcagagcggtttcctcacgccttcgttcagcagcaccagggtcagaggcttc
gatttgacgataccgtattacttcaacctggcgcccaattttgacgccacgttcacaccg
cgaatcctcaccaagcgaggttatctgttacgtggtgagttccggtatctgaccgaaatg
acccgaggccgcctattcgctgagtatatgccccacgatgaggtgcgcggcgattcccga
ggccagttcggtatactgaacgatacgcggttcacagacaatctgtttgcccatgtggac
gccaattacgtgtctgacgaccgttatctgaacgagctaggcaatcagctgaatatcgtc
gaccggcggcatatccgcagttggggtcagttgacttatgtcggcacgaacttcaacgtt
acaaccctggcggattactaccagaccatcgacccgacgataccgccagcggcacggccc
tattaccgcctaccacgggtaactttcaattacgcgcgtggcatcggcaataccggcttt
gtcttcagtggttccagcgagctcgcgaacttcagccatacgggcggccgcgtcaccggt
caacgtctgaacgtcatgcccaggatttcctatccctatcaaaaagccggcggtttcatc
attcccagcctgagtctgcagtacacacaatactggctgcaggatcaaccccccggcctc
agcgatagcccgagtcggaccgcgccgatcttctctctggacagcggcctgtttttcgag
cgcgaatttcaaatgggcgatacgccgctgcttcaaaccctggaaccgcgcctcttttat
ctgtacattcccgacaggaagcaggacgaccttcccgtattcgacaccggggaatacgac
ttcagcttttaccagctatttcgagagaaccggtttaccgggcacgaccgcctaggcgat
gccaatcagatcacactggcgctcacgtctcgaatgatagatcagtcctcgggaatggag
cgactccgggcaagtgtcggagaaattttctacttcgacgatcgcgatgtgagcttgccc
aatctccctcaaagacctgggaacaaatccaacctcgtcggtgaagtctattctcggttg
accaatacctggtctattcgcaccggcggacagtggaatccggaggatggcacgatcgat
cgcggtcagatcgccctgcagtacgacgaccgcgacaaccatctgttcaacgtcgcttat
cgctttcgccgcgaccagaacctcgacttagtccgtctggatctaaccgacgtgtcgttc
cgcttaccgtttgcagaaggatggaacgccattggccgctggcaatattctttgttagac
caggtgacactcgaaagcttccttggaatcgagagggaaacctgttgctggcgtctcagc
atcatagggcgtcattacatcaatgatatacggaccagtgaggacggcggcaatgtcgcc
aacaacgaaatattcgttcagcttgaactgaaaggactgacccgcttcggtcgacagata
gaccggttcttggagcgcagtatcagtggctaccggctagaaggcgatgaatga
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