Methylocaldum szegediense: MSZNOR_3458
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Entry
MSZNOR_3458 CDS
T09668
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00061
Fatty acid biosynthesis
msze00071
Fatty acid degradation
msze01100
Metabolic pathways
msze01212
Fatty acid metabolism
msze02024
Quorum sensing
msze04146
Peroxisome
Module
msze_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MSZNOR_3458 (fadD)
00071 Fatty acid degradation
MSZNOR_3458 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MSZNOR_3458 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSZNOR_3458 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msze01004
]
MSZNOR_3458 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msze04147
]
MSZNOR_3458 (fadD)
Enzymes [BR:
msze01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MSZNOR_3458 (fadD)
Lipid biosynthesis proteins [BR:
msze01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MSZNOR_3458 (fadD)
Exosome [BR:
msze04147
]
Exosomal proteins
Exosomal proteins of breast milk
MSZNOR_3458 (fadD)
Exosomal proteins of breast cancer cells
MSZNOR_3458 (fadD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CAI8901949
UniProt:
A0ABN8XAU9
LinkDB
All DBs
Position
MSZNORmain:complement(3358129..3359847)
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AA seq
572 aa
AA seq
DB search
MRNLQSTVSRRAADKPWLKSYPPGVRETIDEPGYSSLAEFFEKKAAHYRERPALSNLRRI
LTYAELEELSRHFANFLHGHIGLEPGERIAIMLPNVSQQPVAVWGALRAGLTVVNTNPLY
TSRELEHQLRDSGAAALVVLENFVPVVAAVLPRLKLKAIIVSGLGDLLRFPRSYLVNWYA
RLVKNGNLGTHISEAIHFNTALHEGSRLSFKRHDSSPEDIAFLQYTGGTTGVAKGAMLTH
RNLLANVMQCTQWIMGGLPPERALIRGEEVVITALPLYHIFALTVDLLCFTALGGLNHLI
TNPRDLQGLVKTLSKVRFSVITGVNTLFKGLLNTPGFEKLDFSALKFVISGGMPTEEAVA
NRWRDVTGCPITEGYGLTETSPVVAVNPPALMEFNGSIGLPIPSTECSIRDDNGRPLPVG
TVGELYVRGPQVMKGYWNRPDETRKVMTPDGWLRTGDIARMDENGFLYIVDRKKDMILVS
GFNVYPNEIEAVLSAHPAVLECAAIGVPDDKTGEAVKVCIVRKDESLDADAVRQYCRMNL
AAYKVPKYVEFRNELPKSAVGKILRRELRKAT
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaccttcaaagcaccgtgtcgcggagagccgcagacaaaccttggctgaaaagc
tatccccctggggtccgcgaaaccatcgacgagccgggatattcctcgctggcggagttt
ttcgaaaaaaaggccgcccattaccgggaacggccggccctctctaacctcaggcggatt
ctcacctatgccgagctcgaagaattgagccggcatttcgcgaacttcttgcatgggcat
atcggcctggaaccgggcgaacggatcgccatcatgctgccgaacgtttcccaacaaccg
gtcgctgtctggggcgcgctgcgcgccggactcactgtcgtcaacaccaacccgctctat
acatcgcgcgaactggagcatcagctccgggactcgggcgcggcggccctggtggtactc
gagaatttcgtgccggtcgtggctgcggtgcttccgagattgaagctcaaggccatcatc
gtttccggcctcggagatctgttgcgcttcccccgctcgtacctggtcaactggtatgca
cgcctggtcaagaatggaaacctgggtactcacatcagcgaggccattcacttcaacacc
gccctgcatgaaggtagtcgactttctttcaagaggcacgattcgagtccggaggatatc
gccttcctccaatacaccggcggtaccacgggtgtcgccaaaggggcgatgctgacccac
cgtaatctgctggcgaacgtaatgcagtgcacacagtggatcatgggcgggctcccacct
gaaagagccttgatcaggggcgaggaggtcgtgattaccgccctgccgctttaccacatc
tttgcgttgaccgtggatttactttgcttcaccgcactcgggggattgaaccacctcatt
accaatccgcgagatctgcaaggcctcgtcaagacgctcagcaaagtgcgtttcagcgtc
attacgggtgtcaacactctcttcaagggcttactcaacacgcccggcttcgagaaactg
gatttcagtgcgctcaagttcgtgatcagcggcggcatgccgaccgaggaagccgtggca
aaccgctggcgggacgtgaccggctgcccgatcaccgaaggttatggcttgaccgaaacc
tcccccgtggttgccgtcaatccgcccgcattgatggaattcaacggcagcatcggcctt
ccgataccgtccaccgaatgtagcatcagagacgacaacggacgcccgctgccggtcgga
acggtcggcgagctatacgtacgcggaccgcaggtcatgaaaggttattggaaccgcccg
gacgaaacccgcaaggtcatgacacccgatggatggctgcgtaccggcgacatcgcccgc
atggacgaaaacggatttttgtatatcgtggaccgcaagaaggacatgattctcgtctcg
ggcttcaacgtttatcccaacgaaatcgaagccgttctgagtgcccatccggcggttctg
gagtgtgccgcgataggcgtgccggacgataagaccggcgaagcggtcaaggtttgcatc
gtgcgcaaagacgagagccttgatgcagacgccgtccgccaatattgccgtatgaacttg
gcggcgtacaaagtgcctaaatacgtagagttccgcaacgaactgccgaagagcgccgta
ggtaagattctccgtcgggagttgcggaaagcgacttaa
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