Methylocaldum szegediense: MSZNOR_3533
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Entry
MSZNOR_3533 CDS
T09668
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msze03032
]
MSZNOR_3533 (gyrA)
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_3533 (gyrA)
Enzymes [BR:
msze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSZNOR_3533 (gyrA)
DNA replication proteins [BR:
msze03032
]
Prokaryotic type
DNA Topoisomerases
MSZNOR_3533 (gyrA)
DNA repair and recombination proteins [BR:
msze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSZNOR_3533 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAI8905647
LinkDB
All DBs
Position
MSZNORmain:3433092..3435671
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AA seq
859 aa
AA seq
DB search
MTSFAKEIIPVNLEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELSNDWN
KPYKKSARVVGDVIGKYHPHGDAAVYDTIVRMAQPFSLRYMLIDGQGNFGSVDGDPPAAM
RYTEVRMARIAHELLADLEKETVDFVPNYDESEKEPSVLPTRIPNLLINGSAGIAVGMAT
NIPPHNLNEVIDACLLLIEKPDASIAELMEHIPGPDFPTAGIINGASGIREAYLTGRGRI
FIRARCDFEDDGGRTSIVVTELPYQVNKARLMEKIAELVKEGKLEGISGLRDESDKEGMR
MVIELKRGEVPEVVLNNLYQQTAMQSVFGINMVALADGRPRCMNLKELLAAFIDHRREVV
TRRTLYDLRKARERAHILEGQAVALANIDEVIELIKTSPTPADAKQRLLERTWRPGVVSE
LLARAEDAMRSRPENLAVGYGLTENGYNLSPEQAQAILDLRLHRLTGLEQDKIIDEYKQL
LAQIDEFLEILASDKRLMEVIRDELLAIREQFGDKRRTQIIEDHLDLSAEDLITEEDVVV
TVSHEGYVKSQPLSAYRAQRRGGRGKAAATTKEEDFIEKLIVANTHDTILCFSSVGKVYW
LKVYELPSASRASRGKPFVNLLPLEQGERINAILPVREFDGSHYVFMATASGIVKKVALG
EFERPRPSGKIAIDLRQDDYLVNAAITDGKQRVMLFSNAGKAVCFEEDDVRPMGRGATGV
RGMTLNDGQKIIALIIGTEGSVLNVTENGFGKRTALSEFPVHRRGGQGVIAIQTSERNGS
VVGAVLVQDSDEIMLITDAGTLVRTRVEEIRELGRNTQGVMVIRLNPGEKVVGVDRIPVL
EGENEELAESNGNEEGGDG
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgacttccttcgccaaagaaatcattccggtcaatctcgaagacgagatgaagcagtcc
tacctcgattacgccatgagcgtgatcgtgggacgggccttaccggatgttcgcgacggc
ctgaaaccggtgcatcggcgcgtgctctacgccatgcacgaattgagcaacgactggaac
aaaccttataagaaatccgcccgcgtggtgggcgatgtcatcggtaaataccatcctcac
ggcgacgccgcagtttacgacaccatcgtgcgcatggcccagccgttctcgctgcgctac
atgttgatcgatggccaaggcaatttcgggtcggtggacggggatccgccggcggccatg
cgttataccgaagtgcgcatggcccggattgcacacgaactgcttgcggatctcgagaaa
gaaacggtcgacttcgttccgaactacgacgaatccgagaaagagccttccgtgttgcca
acgcgcattccgaatctgcttatcaatggttcggctggcatcgcggtaggcatggcgacc
aacatcccgccccacaatctcaacgaagtcatcgatgcctgcttgctgctgatcgagaaa
ccggatgccagtattgccgaactgatggaacacattccgggtccggattttcccacggcg
ggaatcatcaacggggcgagcggcatccgagaagcgtatcttaccgggcgggggcgaatt
ttcatccgagcccgctgcgatttcgaggatgacggtgggcgcaccagcatcgtcgtcacc
gagctgccgtaccaggtgaacaaggcgcggctcatggaaaaaatcgccgagctggtcaag
gaaggaaagctggagggtatttccggactgcgcgacgaatcggacaaggagggcatgcgc
atggtgatcgagctcaagcgcggcgaagtgccggaagtagtgctgaacaatctgtatcag
cagaccgccatgcagagcgtgttcggcatcaatatggtggccttggcggatggccgcccg
cgctgcatgaatctcaaggagttgctcgcggccttcatcgaccatcgccgcgaagtcgtc
acccggcgcacgctgtacgatctcagaaaggcgcgcgagcgggctcatatcctggaagga
caggccgtcgccctcgcgaatatcgacgaagtgatcgaactgatcaagacctcgcccacc
ccggcggacgcgaaacagcggctgctggagcgcacctggcgtccaggagtggtttcggag
cttctggcgcgggcggaggacgcgatgcggtcgcgtccggaaaaccttgcggtcggttat
ggtttgaccgaaaacggctacaacctgtcacccgagcaggcgcaggcgatcttggatctc
cgtctgcaccgcctgaccggtctcgaacaggacaagatcattgacgagtacaagcagctc
ttggcgcagatcgacgagttcctggaaattctggccagtgacaagcggctgatggaagtc
atccgcgacgagctcctagccatccgcgagcagttcggcgacaagcgccgcacccaaatc
atcgaggatcatctcgatttatccgccgaagatttgattaccgaggaagatgtggtggtc
acggtctcgcacgagggctacgtgaaatcgcagcctctcagtgcctatcgtgcgcagcgg
cgaggcggtcgcggcaaggcggctgcgacgaccaaggaagaggatttcatcgaaaaactt
atagtggccaacacccacgacaccattctgtgtttttcgagcgtgggcaaagtgtactgg
ctcaaagtctacgagctaccttcggccagccgggcttcgcgcggcaagcctttcgtcaat
ctcctaccgttggagcagggcgagcgcatcaatgccattctgccggtgcgggagttcgat
ggaagccattatgtgttcatggcgacagcatccggcatcgtcaagaaagtggccctaggg
gaattcgaacgtccgcgcccgtctgggaaaatcgccatcgatcttcgccaggacgattat
ttggtgaatgctgccatcacagacggcaagcagcgggtcatgctgttcagcaatgcgggc
aaggccgtttgcttcgaggaggacgacgtccggcctatggggcgcggcgcgaccggcgtt
cgtggtatgacgctgaacgacggacaaaagatcatcgctctcattatcggcaccgaggga
tcggtgttgaatgtcaccgaaaacggcttcggcaaacgcacggccctaagcgagttcccg
gtacatcgtcgcggtggtcagggtgtgatcgccattcaaaccagcgaacgtaacggctcg
gtggtcggcgctgtgctggtacaggactcggatgaaatcatgttgatcacggacgccggc
acactcgtaaggacgcgagtcgaagagattcgggaactcggacgcaacacccagggtgtg
atggtcattcgtctcaatccgggcgaaaaagtggtcggagtggacaggattccggttctc
gagggcgaaaacgaggaattggcggagtcgaatggaaacgaggagggtggcgatggctag
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