Methylocaldum szegediense: MSZNOR_3541
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Entry
MSZNOR_3541 CDS
T09668
Symbol
rpsA
Name
(GenBank) 30S ribosomal subunit protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
msze
Methylocaldum szegediense
Pathway
msze03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MSZNOR_3541 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
msze03011
]
MSZNOR_3541 (rpsA)
Ribosome [BR:
msze03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
MSZNOR_3541 (rpsA)
Bacteria
MSZNOR_3541 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
CsrA
Motif
Other DBs
NCBI-ProteinID:
CAI8906040
LinkDB
All DBs
Position
MSZNORmain:3443150..3444820
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AA seq
556 aa
AA seq
DB search
MSESFAQLFEESLRQAEMRPGSIITGTVVDIGPDVVVVNAGLKSEGVIPKWQFLNADGQI
EVQVGDTVEVALDMLEDGLGSTLLSRDKAKRMKAWQELERAYENNETVVGRITGKVRGGF
TVAIGALRAFLPGSLVDVRPVRDTSYLEGRDLEFKVIKIDQKRNNVVLSRRAVVESEFSA
EKEALLESLKEGAIVTGVVKNLTDYGAFIDLGGIDGLLHITDMAWKRVRHPSEAVQIGQE
IQVKVLKFDQEKNRVSLGLKQLGEDPWLNIARRYPPGTRLFGKVSNLTDYGCFVELEEGV
EGLVHVSEMDWTNKNVNPAKVIQLGEEVEVMVLDIDEERRRISLGMKQCKPNPWEEFAAT
HKKGDKIKGNIKSITDFGIFIGLEGSIDGLVHLSDISWSIPGEEAIRQYKKGDEVETVIL
AIDPERERISLGIKQLEQDPFQNYLATHEKGSVVQGVVKEVDAKGAIVTLADSVEGYLRA
SEISRDRVEDARTQLKVGDEIEAKFIGVDKKNKLITLSIKAKDQEEEAAAIKGYAQQSAS
GMPTLGDIFKEQMENK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcacaactgtttgaagagagtctgcgtcaggcggagatgcggcca
ggcagcatcattaccggcactgtggtcgatataggccctgatgtggtcgtggtcaacgct
ggtttgaagtcggaaggcgtcattccgaaatggcagttcctgaatgcggacgggcaaatc
gaggtacaggttggcgacaccgtcgaggtggcgctcgatatgctggaagatggccttggg
tccacgcttttgtcccgtgacaaggcaaagcggatgaaggcgtggcaggagcttgagcga
gcgtacgagaacaatgaaacagtggtcggtcgaatcaccggtaaggtacgcggcggcttc
accgtggccatcggtgcgcttcgcgcctttttgccgggctctctggtcgatgtgcgccca
gtgcgcgacacttcctatctcgagggacgcgatctcgaattcaaggttatcaagatcgac
cagaagcgcaacaacgtcgtgctttcccgtcgagccgtcgtggagtccgaattcagtgcc
gagaaggaagcgctgctcgaaagcctaaaggaaggcgctatcgttacgggtgtggtaaag
aaccttaccgattacggtgccttcatcgacttgggcggcattgacggtcttcttcatatt
acggacatggcatggaagcgagtgcggcacccttccgaagccgtccagatcggccaggag
attcaggttaaggtactgaaattcgatcaggaaaagaaccgggtctcgcttggtttgaag
cagttgggagaagacccgtggctgaatatcgcacgtcgctatccgccgggtactcggctt
ttcggtaaggttagcaatcttaccgattacggctgtttcgtcgagttggaagagggtgtc
gagggcctcgttcacgtttccgagatggattggaccaataagaacgtcaacccggccaag
gtgatccagctgggtgaggaagttgaggtcatggtgctcgatatcgacgaggaacgtcgt
cgcatttcgctaggcatgaagcagtgtaagcctaacccgtgggaagagttcgctgcgacc
cacaagaagggcgataaaattaaggggaatattaagtccattacggattttggtattttc
atcggattggaaggctctattgatggcctcgttcatctgtcagatatttcctggtccata
ccgggcgaagaggcgatccgacagtacaaaaaaggcgacgaagtggaaaccgtcattctg
gccattgatcctgagcgggagcgtatctctcttggtatcaagcagctggagcaggatccc
ttccagaattatttagcgacccatgagaagggcagtgtcgttcagggcgtcgtcaaagag
gtcgatgcaaaaggagcaatagttacgttggccgatagcgtagagggctatctccgcgct
tccgagatttctcgcgatcgagtagaagacgcccgcacccaattgaaagtgggcgatgag
atcgaggcaaaattcattggcgtcgacaagaaaaacaagttgattacgctttcgatcaaa
gccaaagatcaagaggaggaggctgcggcgatcaagggatacgctcagcaatctgcgtcc
ggcatgccgacgttgggagatatcttcaaggaacagatggaaaataaatag
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