Methylocaldum szegediense: MSZNOR_3639
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Entry
MSZNOR_3639 CDS
T09668
Symbol
xerD
Name
(GenBank) site-specific recombinase
KO
K04763
integrase/recombinase XerD
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msze03036
]
MSZNOR_3639 (xerD)
Chromosome and associated proteins [BR:
msze03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MSZNOR_3639 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
CAI8910920
LinkDB
All DBs
Position
MSZNORmain:3528252..3529172
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AA seq
306 aa
AA seq
DB search
MGLNELRVADSDADLIRRFVNALWVEEGLSENTQKAYCSDISLFAVWLSNTHQKALCEAD
TGEIEGYLALKYRQKASERSSARLLSSLRKFYLFALREGSVDRDPTASIEAPRIGRTLPK
TLTEKDVEALLAAPNSDEPLGCRDRAMLEVLYATGLRVSELVGLKLGQLNLRQGVVRVVG
KGSKDRLVPIGEEAEDWVNRYLKTARLAILRGRRSEYLFVTDRGAGMTRQAFWHLIKRYA
FLAGIRKPLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSSTQIYTHVAQERLKDLHA
RCHPRG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaatgaactgcgtgttgctgattctgacgctgacctgatccggcgttttgta
aatgccttgtgggtagaagaaggattaagcgagaacacgcagaaagcatactgcagcgat
atctccctatttgccgtttggttgagcaatacccatcaaaaggcgctttgcgaagccgac
acgggcgagatagagggctatttggcactcaaatatcgtcaaaaggcaagcgagcggagc
agcgccagattattatcaagcctgcgtaagttttatctgttcgcgcttcgtgaaggaagc
gtggatagagatccgactgcgtccatagaggcgccccggattggtcgtactctgccaaag
acgttgacagaaaaggatgtggaagcgctgttggcggctcccaatagtgatgagcctttg
ggctgccgtgaccgcgctatgttggaggtgctttatgctaccgggcttcgagtgagcgaa
ttagtcgggctcaagctcggacaactgaatctccgtcaaggtgttgttcgcgtggtgggt
aaaggaagcaaggatcgcttggttccgattggggaagaggctgaggattgggtgaatcgt
taccttaagaccgcgcggctagctattttaagagggcggcgcagcgagtatctgttcgtc
acggatcgcggagcgggtatgacccgtcaggcgttctggcacctcatcaagcggtatgcc
tttctcgccggaatccgcaagccgttgtcgccgcataccttgagacacgcctttgccacg
catttgttgaatcacggcgcggatcttcgggtggttcaactcctgctggggcacagcgat
ttatcgagcacccagatttatactcacgtggcgcaggagcgcttgaaggacctccatgcc
cgctgtcatccgcgcgggtga
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